The 2.0 version of rSNPBase

Variant report

Variant rs60619855
Chromosome Location chr11:8753648-8753649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8736200-8773800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr11:8742600-8754000 Weak transcription Hela-S3 cervix
3 chr11:8744000-8754200 Weak transcription A549 lung
4 chr11:8744200-8757600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr11:8745000-8754400 Weak transcription Small Intestine intestine
6 chr11:8745600-8754000 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr11:8746000-8754200 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr11:8746200-8757400 Weak transcription H1 Cell Line embryonic stem cell
9 chr11:8746400-8757200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr11:8746600-8757200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr11:8746600-8783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:8747800-8756400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr11:8748800-8754600 Weak transcription Fetal Thymus thymus
14 chr11:8749000-8754200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr11:8749400-8754400 Weak transcription Duodenum Mucosa Duodenum
16 chr11:8749400-8754600 Weak transcription Fetal Kidney kidney
17 chr11:8750200-8753800 Strong transcription Fetal Intestine Small intestine
18 chr11:8750600-8753800 Weak transcription Brain Cingulate Gyrus brain
19 chr11:8750600-8754000 Weak transcription Psoas Muscle Psoas
20 chr11:8750800-8760200 Weak transcription Fetal Brain Male brain
21 chr11:8751200-8754000 Weak transcription Brain Angular Gyrus brain
22 chr11:8751400-8753800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr11:8751600-8754000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr11:8751600-8754000 Weak transcription Fetal Lung lung
25 chr11:8751600-8754000 Weak transcription HepG2 liver
26 chr11:8751600-8754000 Weak transcription NHEK skin
27 chr11:8752000-8755800 Enhancers Right Atrium heart
28 chr11:8752400-8755200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr11:8752400-8755400 Weak transcription K562 blood
30 chr11:8752600-8754600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr11:8752600-8755800 Enhancers Right Ventricle heart
32 chr11:8752600-8756000 Enhancers Primary B cells from peripheral blood blood
33 chr11:8752600-8769800 Weak transcription Colonic Mucosa Colon
34 chr11:8752600-8775200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr11:8752800-8754000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr11:8752800-8754000 Weak transcription Placenta Amnion Placenta Amnion
37 chr11:8752800-8755600 Enhancers Colon Smooth Muscle Colon
38 chr11:8752800-8755600 Enhancers HSMMtube muscle
39 chr11:8752800-8755800 Enhancers Skeletal Muscle Female skeletal muscle
40 chr11:8752800-8758600 Enhancers Left Ventricle heart
41 chr11:8753000-8753800 Enhancers Primary B cells from cord blood blood
42 chr11:8753000-8754000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:8753000-8754000 Enhancers Skeletal Muscle Male skeletal muscle
44 chr11:8753000-8754200 Enhancers HSMM muscle
45 chr11:8753000-8754400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr11:8753000-8755200 Enhancers Adipose Nuclei Adipose
47 chr11:8753000-8755200 Enhancers Aorta Aorta
48 chr11:8753000-8755600 Genic enhancers Fetal Muscle Leg muscle
49 chr11:8753000-8755600 Enhancers Lung lung
50 chr11:8753000-8755600 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015