The 2.0 version of rSNPBase

Variant report

Variant rs74053134
Chromosome Location chr11:8757900-8757901
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8736200-8773800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr11:8746600-8783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:8750800-8760200 Weak transcription Fetal Brain Male brain
4 chr11:8752600-8769800 Weak transcription Colonic Mucosa Colon
5 chr11:8752600-8775200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr11:8752800-8758600 Enhancers Left Ventricle heart
7 chr11:8753000-8780600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr11:8753200-8759600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:8754600-8771000 Weak transcription Placenta Amnion Placenta Amnion
10 chr11:8754600-8778400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr11:8754800-8760600 Strong transcription Fetal Stomach stomach
12 chr11:8754800-8762400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr11:8755200-8760400 Weak transcription Aorta Aorta
14 chr11:8755200-8762200 Weak transcription Brain Anterior Caudate brain
15 chr11:8755200-8762400 Weak transcription Brain Hippocampus Middle brain
16 chr11:8755200-8767000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr11:8755200-8771600 Weak transcription Hela-S3 cervix
18 chr11:8755200-8774200 Weak transcription Brain Angular Gyrus brain
19 chr11:8755200-8778200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr11:8755400-8759600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr11:8755400-8763800 Genic enhancers Breast Myoepithelial Primary Cells Breast
22 chr11:8755400-8770600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:8755600-8758200 Weak transcription HSMMtube muscle
24 chr11:8755600-8758400 Weak transcription Fetal Lung lung
25 chr11:8755600-8760400 Weak transcription Pancreas Pancrea
26 chr11:8755600-8763000 Strong transcription Fetal Muscle Leg muscle
27 chr11:8755600-8768200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr11:8755600-8777200 Weak transcription Psoas Muscle Psoas
29 chr11:8755800-8758000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr11:8755800-8758000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr11:8755800-8759400 Weak transcription Muscle Satellite Cultured Cells --
32 chr11:8755800-8760200 Weak transcription A549 lung
33 chr11:8755800-8760800 Weak transcription Brain Substantia Nigra brain
34 chr11:8755800-8761200 Weak transcription Rectal Smooth Muscle rectum
35 chr11:8755800-8762400 Weak transcription HSMM muscle
36 chr11:8755800-8764000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr11:8755800-8767000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr11:8755800-8770200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr11:8755800-8780800 Weak transcription Brain Cingulate Gyrus brain
40 chr11:8756000-8758000 Weak transcription HepG2 liver
41 chr11:8756000-8758800 Weak transcription Colon Smooth Muscle Colon
42 chr11:8756000-8759400 Weak transcription NHEK skin
43 chr11:8756000-8759600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr11:8756000-8761200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr11:8756000-8761800 Weak transcription NHDF-Ad bronchial
46 chr11:8756000-8765200 Weak transcription HMEC breast
47 chr11:8756000-8768400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr11:8756000-8768400 Weak transcription Stomach Mucosa stomach
49 chr11:8756000-8776000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr11:8756200-8767800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015