Variant report

Variant	rs60804007
Chromosome Location	chr11:26154062-26154063
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs60118133	1.00[AMR][1000 genomes]
rs60444535	1.00[AMR][1000 genomes]
rs61142566	1.00[AMR][1000 genomes]
rs73429405	1.00[AMR][1000 genomes]
rs73433493	1.00[AMR][1000 genomes]
rs73435421	1.00[AMR][1000 genomes]
rs73435469	1.00[AMR][1000 genomes]
rs73435470	1.00[AMR][1000 genomes]
rs73435474	1.00[AMR][1000 genomes]
rs73435493	1.00[AMR][1000 genomes]
rs73435497	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435500	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437503	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437513	1.00[AMR][1000 genomes]
rs73437515	1.00[AMR][1000 genomes]
rs73437521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73437543	1.00[AMR][1000 genomes]
rs73437546	1.00[AMR][1000 genomes]
rs73437567	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv832094	chr11:26130733-26292782	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26154000-26154400	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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