Variant report

Variant rs60882787
Chromosome Location chr5:178745827-178745828
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178740800-178746000 Bivalent Enhancer Fetal Muscle Trunk muscle
2 chr5:178741000-178747800 Enhancers Adipose Nuclei Adipose
3 chr5:178741800-178746000 Weak transcription Fetal Heart heart
4 chr5:178742000-178758000 Weak transcription Colon Smooth Muscle Colon
5 chr5:178742600-178746000 Weak transcription Stomach Smooth Muscle stomach
6 chr5:178742600-178747000 Weak transcription Placenta Amnion Placenta Amnion
7 chr5:178742800-178753000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr5:178743400-178746400 Weak transcription Ovary ovary
9 chr5:178743800-178747800 Enhancers Fetal Muscle Leg muscle
10 chr5:178744000-178746000 Enhancers Fetal Lung lung
11 chr5:178744000-178746600 Enhancers Fetal Brain Female brain
12 chr5:178744000-178747400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr5:178744200-178746800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr5:178744200-178747800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr5:178744200-178748200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:178744400-178746000 Enhancers Fetal Brain Male brain
17 chr5:178744400-178746400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr5:178744400-178747600 Weak transcription Colonic Mucosa Colon
19 chr5:178744600-178746000 Weak transcription Osteobl bone
20 chr5:178744600-178746200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
21 chr5:178744600-178746400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
22 chr5:178744600-178747800 Enhancers NHDF-Ad bronchial
23 chr5:178744600-178748200 Enhancers Muscle Satellite Cultured Cells --
24 chr5:178744800-178746000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:178744800-178746200 Enhancers Brain Inferior Temporal Lobe brain
26 chr5:178744800-178747400 Bivalent Enhancer Placenta Placenta
27 chr5:178744800-178747800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:178745000-178746000 Weak transcription Pancreas Pancrea
29 chr5:178745000-178746200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr5:178745000-178746200 Enhancers Brain Cingulate Gyrus brain
31 chr5:178745000-178747200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr5:178745000-178747800 Enhancers HSMM muscle
33 chr5:178745000-178748000 Enhancers HSMMtube muscle
34 chr5:178745000-178749800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr5:178745200-178746000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr5:178745200-178746000 Enhancers Brain Hippocampus Middle brain
37 chr5:178745200-178746000 Weak transcription Right Atrium heart
38 chr5:178745200-178746000 Weak transcription Spleen Spleen
39 chr5:178745200-178746200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr5:178745400-178747400 Bivalent Enhancer Fetal Stomach stomach
41 chr5:178745600-178746200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr5:178745600-178746400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr5:178745600-178746600 Enhancers Lung lung
44 chr5:178745600-178748000 Enhancers NHLF lung
45 chr5:178745800-178746000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr5:178745800-178746400 Enhancers Brain Germinal Matrix brain
47 chr5:178745800-178746800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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