Variant report

Variant rs61095604
Chromosome Location chr5:178746181-178746182
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178741000-178747800 Enhancers Adipose Nuclei Adipose
2 chr5:178742000-178758000 Weak transcription Colon Smooth Muscle Colon
3 chr5:178742600-178747000 Weak transcription Placenta Amnion Placenta Amnion
4 chr5:178742800-178753000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:178743400-178746400 Weak transcription Ovary ovary
6 chr5:178743800-178747800 Enhancers Fetal Muscle Leg muscle
7 chr5:178744000-178746600 Enhancers Fetal Brain Female brain
8 chr5:178744000-178747400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:178744200-178746800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:178744200-178747800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:178744200-178748200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr5:178744400-178746400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:178744400-178747600 Weak transcription Colonic Mucosa Colon
14 chr5:178744600-178746200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
15 chr5:178744600-178746400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
16 chr5:178744600-178747800 Enhancers NHDF-Ad bronchial
17 chr5:178744600-178748200 Enhancers Muscle Satellite Cultured Cells --
18 chr5:178744800-178746200 Enhancers Brain Inferior Temporal Lobe brain
19 chr5:178744800-178747400 Bivalent Enhancer Placenta Placenta
20 chr5:178744800-178747800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:178745000-178746200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr5:178745000-178746200 Enhancers Brain Cingulate Gyrus brain
23 chr5:178745000-178747200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr5:178745000-178747800 Enhancers HSMM muscle
25 chr5:178745000-178748000 Enhancers HSMMtube muscle
26 chr5:178745000-178749800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:178745200-178746200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr5:178745400-178747400 Bivalent Enhancer Fetal Stomach stomach
29 chr5:178745600-178746200 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr5:178745600-178746400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr5:178745600-178746600 Enhancers Lung lung
32 chr5:178745600-178748000 Enhancers NHLF lung
33 chr5:178745800-178746400 Enhancers Brain Germinal Matrix brain
34 chr5:178745800-178746800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:178746000-178746200 Bivalent Enhancer Fetal Brain Male brain
36 chr5:178746000-178746200 Weak transcription Gastric stomach
37 chr5:178746000-178746200 Enhancers Pancreas Pancrea
38 chr5:178746000-178746400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:178746000-178746400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
40 chr5:178746000-178746400 Enhancers Osteobl bone
41 chr5:178746000-178746600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr5:178746000-178746600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:178746000-178746600 Enhancers Fetal Heart heart
44 chr5:178746000-178746600 Flanking Bivalent TSS/Enh Fetal Lung lung
45 chr5:178746000-178746600 Enhancers Right Atrium heart
46 chr5:178746000-178746600 Genic enhancers Spleen Spleen
47 chr5:178746000-178747000 Weak transcription Brain Hippocampus Middle brain
48 chr5:178746000-178747200 Enhancers Fetal Muscle Trunk muscle
49 chr5:178746000-178747400 Enhancers Stomach Smooth Muscle stomach

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