Variant report

Variant	rs60944865
Chromosome Location	chr7:103539613-103539614
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103537933..103539744-chr7:103542239..103544232,2	K562	blood:
2	chr7:103538244..103539746-chr7:103542732..103544465,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10260005	0.83[EUR][1000 genomes]
rs10458283	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10458285	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17157125	0.93[AFR][1000 genomes]
rs28770307	0.82[EUR][1000 genomes]
rs28860292	0.82[EUR][1000 genomes]
rs28885406	0.82[EUR][1000 genomes]
rs3857817	0.93[AFR][1000 genomes]
rs3857818	0.82[EUR][1000 genomes]
rs3898842	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3898844	0.82[EUR][1000 genomes]
rs3898845	0.82[EUR][1000 genomes]
rs3907884	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3915122	0.82[EUR][1000 genomes]
rs4125503	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57310861	0.82[EUR][1000 genomes]
rs58098888	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58130032	0.85[AFR][1000 genomes]
rs58315603	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58835721	0.82[EUR][1000 genomes]
rs59561019	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60648014	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6951651	0.82[EUR][1000 genomes]
rs6951845	0.81[EUR][1000 genomes]
rs6971649	0.82[EUR][1000 genomes]
rs9987028	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103531200-103546000	Weak transcription	HepG2	liver
2	chr7:103537000-103543000	Weak transcription	K562	blood

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