Variant report

Variant rs609984
Chromosome Location chr5:15519332-15519333
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:15501800-15523800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:15502000-15522200 Weak transcription H9 Cell Line embryonic stem cell
3 chr5:15502600-15522400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr5:15502600-15535400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:15502800-15521400 Weak transcription Stomach Smooth Muscle stomach
6 chr5:15503400-15521000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr5:15503800-15521000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr5:15504600-15521200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:15511200-15522000 Weak transcription Fetal Brain Male brain
10 chr5:15511200-15527400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr5:15511400-15521000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:15511600-15521200 Weak transcription Fetal Lung lung
13 chr5:15511600-15522400 Weak transcription HSMMtube muscle
14 chr5:15511800-15521400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr5:15511800-15521400 Weak transcription Osteobl bone
16 chr5:15512000-15522000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr5:15512200-15521600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:15512200-15524600 Weak transcription HSMM muscle
19 chr5:15512200-15571200 Weak transcription HUVEC blood vessel
20 chr5:15512400-15521200 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr5:15512400-15521600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr5:15512600-15521000 Weak transcription Colon Smooth Muscle Colon
23 chr5:15515200-15521600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr5:15515200-15526600 Weak transcription Ovary ovary
25 chr5:15515200-15532800 Weak transcription Aorta Aorta
26 chr5:15515400-15521000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:15515400-15521000 Weak transcription Brain Hippocampus Middle brain
28 chr5:15515600-15521000 Weak transcription Adipose Nuclei Adipose
29 chr5:15515600-15521000 Weak transcription Fetal Muscle Leg muscle
30 chr5:15515600-15521200 Weak transcription Brain Anterior Caudate brain
31 chr5:15515600-15525000 Weak transcription Psoas Muscle Psoas
32 chr5:15515800-15521000 Weak transcription Brain Substantia Nigra brain
33 chr5:15515800-15521200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr5:15516000-15521000 Weak transcription NHDF-Ad bronchial
35 chr5:15517600-15526200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr5:15517800-15519800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:15518200-15520600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:15518600-15521600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:15518800-15521000 Weak transcription Right Atrium heart
40 chr5:15518800-15521600 Weak transcription Right Ventricle heart
41 chr5:15518800-15522400 Enhancers Fetal Heart heart
42 chr5:15518800-15547400 Weak transcription Fetal Muscle Trunk muscle
43 chr5:15519000-15520000 Enhancers Dnd41 blood
44 chr5:15519000-15521200 Weak transcription Fetal Stomach stomach
45 chr5:15519000-15521600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr5:15519000-15532800 Weak transcription Esophagus oesophagus
47 chr5:15519200-15521000 Weak transcription Left Ventricle heart
48 chr5:15519200-15521200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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