Variant report

Variant	rs61002646
Chromosome Location	chr14:68837019-68837020
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68762186..68763785-chr14:68835933..68838627,2	K562	blood:
2	chr14:68834932..68837443-chr14:69252432..69254129,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs28418632	0.89[AFR][1000 genomes]
rs57439653	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv564962	chr14:68795209-68837882	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68829600-68837400	Enhancers	Primary hematopoietic stem cells	blood
2	chr14:68829600-68837400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr14:68829800-68837400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr14:68831800-68838400	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:68831800-68841600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:68831800-68844200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:68832000-68843200	Weak transcription	Placenta	Placenta
8	chr14:68832000-68843800	Weak transcription	Ovary	ovary
9	chr14:68832000-68844200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:68832000-68851600	Weak transcription	Lung	lung
11	chr14:68832200-68838600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr14:68832200-68841600	Weak transcription	Pancreas	Pancrea
13	chr14:68832200-68844200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr14:68832200-68844200	Weak transcription	Brain Germinal Matrix	brain
15	chr14:68833000-68845200	Enhancers	Primary B cells from peripheral blood	blood
16	chr14:68833400-68838600	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr14:68833600-68842200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr14:68833800-68838400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr14:68833800-68838800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:68834000-68838200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr14:68834000-68843400	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr14:68834200-68837400	Enhancers	Fetal Thymus	thymus
23	chr14:68834400-68837400	Enhancers	Primary T helper cells fromperipheralblood	blood
24	chr14:68834400-68837400	Enhancers	Adipose Nuclei	Adipose
25	chr14:68834400-68841400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr14:68834400-68846400	Weak transcription	Fetal Heart	heart
27	chr14:68834600-68838400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr14:68834600-68838600	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr14:68834600-68842200	Weak transcription	HSMM	muscle
30	chr14:68835000-68837200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr14:68835000-68837400	Enhancers	Small Intestine	intestine
32	chr14:68835000-68841600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr14:68835200-68837400	Enhancers	Fetal Muscle Leg	muscle
34	chr14:68835200-68837400	Flanking Active TSS	GM12878-XiMat	blood
35	chr14:68835200-68840200	Weak transcription	Monocytes-CD14+_RO01746	blood
36	chr14:68835200-68843600	Weak transcription	Brain Anterior Caudate	brain
37	chr14:68835400-68840000	Weak transcription	Primary monocytes fromperipheralblood	blood
38	chr14:68835600-68843800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr14:68835800-68837400	Enhancers	Sigmoid Colon	Sigmoid Colon
40	chr14:68836000-68837200	Enhancers	Brain Substantia Nigra	brain
41	chr14:68836000-68837400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr14:68836400-68837200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
43	chr14:68836400-68837400	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr14:68836400-68837400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr14:68836400-68837400	Enhancers	Fetal Stomach	stomach
46	chr14:68836400-68837400	Enhancers	Stomach Mucosa	stomach
47	chr14:68836400-68837600	Enhancers	Cortex derived primary cultured neurospheres	brain
48	chr14:68836400-68839800	Enhancers	Primary B cells from cord blood	blood
49	chr14:68836400-68840800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
50	chr14:68836400-68843200	Weak transcription	Spleen	Spleen

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