Variant report

Variant	rs61079625
Chromosome Location	chr2:21206720-21206721
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs56080455	0.85[AFR][1000 genomes]
rs56164002	0.83[AMR][1000 genomes]
rs73918003	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73918005	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73918008	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73918011	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73921326	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73921332	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73921339	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73921340	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7594128	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21200200-21207000	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr2:21203800-21206800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr2:21204800-21207000	Enhancers	Fetal Muscle Trunk	muscle
4	chr2:21205200-21206800	Weak transcription	Stomach Smooth Muscle	stomach
5	chr2:21205600-21208600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr2:21205800-21207400	Enhancers	Fetal Muscle Leg	muscle
7	chr2:21206200-21207000	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr2:21206200-21208200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr2:21206400-21207000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr2:21206400-21207000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr2:21206400-21207000	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr2:21206400-21207200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr2:21206400-21207600	Enhancers	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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