Variant report

Variant	rs61201104
Chromosome Location	chr3:143617941-143617942
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2361210	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60705908	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6803662	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73010596	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73010600	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7617190	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7628380	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7628788	1.00[ASN][1000 genomes]
rs7650329	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:143616200-143618000	Enhancers	NHLF	lung
2	chr3:143616800-143618000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:143616800-143619600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr3:143617000-143618600	Weak transcription	HMEC	breast
5	chr3:143617000-143618800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr3:143617000-143619000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:143617000-143619600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr3:143617000-143619600	Weak transcription	NH-A	brain
9	chr3:143617200-143619200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:143617200-143619600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr3:143617200-143619600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr3:143617200-143619600	Weak transcription	HSMM	muscle
13	chr3:143617200-143619600	Weak transcription	NHEK	skin
14	chr3:143617200-143619600	Weak transcription	Osteobl	bone
15	chr3:143617600-143619400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr3:143617600-143619400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr3:143617600-143619600	Weak transcription	NHDF-Ad	bronchial
18	chr3:143617800-143618400	Weak transcription	Fetal Brain Female	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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