The 2.0 version of rSNPBase

Variant report

Variant rs61278898
Chromosome Location chr6:72019563-72019564
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71999800-72033800 Weak transcription Right Ventricle heart
2 chr6:72001000-72021600 Weak transcription Fetal Lung lung
3 chr6:72001000-72038800 Weak transcription Aorta Aorta
4 chr6:72001800-72020000 Weak transcription Fetal Brain Female brain
5 chr6:72002000-72022000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:72004200-72021800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:72004200-72030600 Weak transcription Lung lung
8 chr6:72004200-72041600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:72004400-72019600 Weak transcription NH-A brain
10 chr6:72004400-72021600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr6:72004400-72030800 Weak transcription Pancreas Pancrea
12 chr6:72004400-72043000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:72007000-72023000 Weak transcription Liver Liver
14 chr6:72009800-72025800 Weak transcription Hela-S3 cervix
15 chr6:72010200-72019600 Weak transcription A549 lung
16 chr6:72010800-72020000 Weak transcription Brain Hippocampus Middle brain
17 chr6:72010800-72022400 Weak transcription NHEK skin
18 chr6:72010800-72038800 Weak transcription Fetal Kidney kidney
19 chr6:72011600-72020000 Weak transcription Left Ventricle heart
20 chr6:72011600-72021600 Weak transcription Psoas Muscle Psoas
21 chr6:72011600-72022600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr6:72011600-72033600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:72011800-72022600 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr6:72011800-72022800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr6:72013200-72020200 Weak transcription HMEC breast
26 chr6:72013200-72022400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:72013200-72035800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:72013800-72022600 Weak transcription Adipose Nuclei Adipose
29 chr6:72018000-72020400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr6:72018000-72021600 Weak transcription Fetal Heart heart
31 chr6:72018000-72037800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr6:72018000-72043200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:72018000-72043200 Weak transcription HSMM muscle
34 chr6:72018400-72020400 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr6:72018400-72022000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:72018600-72030800 Weak transcription Placenta Placenta
37 chr6:72018800-72019600 Enhancers Brain Angular Gyrus brain
38 chr6:72018800-72019600 Enhancers Fetal Brain Male brain
39 chr6:72019000-72019600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:72019000-72019600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:72019000-72020200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:72019000-72020200 Enhancers HSMMtube muscle
43 chr6:72019000-72020400 Enhancers Brain Anterior Caudate brain
44 chr6:72019200-72019800 Enhancers Osteobl bone
45 chr6:72019200-72026400 Weak transcription Muscle Satellite Cultured Cells --
46 chr6:72019400-72020200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr6:72019400-72022600 Weak transcription Cortex derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015