Variant report

Variant rs61325680
Chromosome Location chr1:217077019-217077020
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:217062600-217078000 Weak transcription Pancreas Pancrea
2 chr1:217062800-217087800 Weak transcription Fetal Muscle Leg muscle
3 chr1:217072200-217082800 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:217074400-217080000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:217074600-217078800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:217075200-217078800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:217075400-217077200 Enhancers Brain Hippocampus Middle brain
8 chr1:217075800-217077200 Enhancers Fetal Intestine Large intestine
9 chr1:217075800-217077400 Enhancers Muscle Satellite Cultured Cells --
10 chr1:217075800-217077400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:217075800-217077400 Enhancers HSMM muscle
12 chr1:217075800-217079000 Enhancers HepG2 liver
13 chr1:217076000-217077200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:217076000-217077200 Enhancers Brain Angular Gyrus brain
15 chr1:217076000-217077200 Enhancers Stomach Smooth Muscle stomach
16 chr1:217076000-217077200 Enhancers HSMMtube muscle
17 chr1:217076000-217077600 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:217076000-217078200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:217076000-217078200 Enhancers NH-A brain
20 chr1:217076000-217078400 Enhancers Fetal Lung lung
21 chr1:217076000-217078400 Enhancers Stomach Mucosa stomach
22 chr1:217076000-217078600 Enhancers Right Atrium heart
23 chr1:217076000-217079000 Enhancers Fetal Heart heart
24 chr1:217076000-217079000 Enhancers Placenta Amnion Placenta Amnion
25 chr1:217076000-217079400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:217076200-217077200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:217076400-217077200 Enhancers Fetal Brain Male brain
28 chr1:217076400-217077200 Weak transcription Left Ventricle heart
29 chr1:217076400-217077400 Flanking Active TSS HMEC breast
30 chr1:217076400-217078800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:217076600-217077400 Flanking Active TSS NHEK skin
32 chr1:217076600-217079600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:217076600-217079800 Weak transcription Small Intestine intestine
34 chr1:217076800-217078200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:217076800-217083600 Weak transcription Brain Anterior Caudate brain
36 chr1:217077000-217077400 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr1:217077000-217077800 Weak transcription Right Ventricle heart
38 chr1:217077000-217078600 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr1:217077000-217078600 Flanking Active TSS Fetal Intestine Small intestine
40 chr1:217077000-217081600 Weak transcription Gastric stomach
41 chr1:217077000-217082400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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