Variant report

Variant rs61345374
Chromosome Location chr4:22239661-22239662
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:22238400-22239800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:22238800-22240000 Active TSS Rectal Mucosa Donor 31 rectum
3 chr4:22238800-22240400 Enhancers Brain Hippocampus Middle brain
4 chr4:22239000-22240200 Active TSS Duodenum Mucosa Duodenum
5 chr4:22239000-22240200 Active TSS Fetal Intestine Small intestine
6 chr4:22239000-22240400 Active TSS Colonic Mucosa Colon
7 chr4:22239000-22240800 Active TSS Rectal Mucosa Donor 29 rectum
8 chr4:22239200-22239800 Active TSS Primary T helper cells fromperipheralblood blood
9 chr4:22239200-22240000 Active TSS Primary T cells fromperipheralblood blood
10 chr4:22239200-22240000 Active TSS Pancreatic Islets Pancreatic Islet
11 chr4:22239200-22240200 Active TSS Primary hematopoietic stem cells blood
12 chr4:22239200-22240200 Active TSS Ovary ovary
13 chr4:22239200-22240200 Active TSS Stomach Mucosa stomach
14 chr4:22239400-22239800 Active TSS Breast Myoepithelial Primary Cells Breast
15 chr4:22239400-22239800 Active TSS Primary B cells from cord blood blood
16 chr4:22239400-22239800 Active TSS Primary T cells from cord blood blood
17 chr4:22239400-22240000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr4:22239400-22240000 Active TSS Primary B cells from peripheral blood blood
19 chr4:22239400-22240200 Active TSS Duodenum Smooth Muscle Duodenum
20 chr4:22239400-22240200 Active TSS Fetal Intestine Large intestine
21 chr4:22239400-22240200 Enhancers HepG2 liver
22 chr4:22239400-22240600 Enhancers HUES64 Cell Line embryonic stem cell
23 chr4:22239600-22239800 Enhancers HUES48 Cell Line embryonic stem cell
24 chr4:22239600-22239800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr4:22239600-22239800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr4:22239600-22239800 Enhancers Brain Substantia Nigra brain
27 chr4:22239600-22240000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:22239600-22240000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr4:22239600-22240000 Enhancers Brain Angular Gyrus brain
30 chr4:22239600-22240200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr4:22239600-22240200 Active TSS Rectal Smooth Muscle rectum
32 chr4:22239600-22240200 Active TSS Osteobl bone
33 chr4:22239600-22240400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:22239600-22240400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr4:22239600-22240400 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr4:22239600-22240400 Enhancers Cortex derived primary cultured neurospheres brain
37 chr4:22239600-22240400 Flanking Active TSS Liver Liver
38 chr4:22239600-22240400 Active TSS Brain Anterior Caudate brain
39 chr4:22239600-22240400 Enhancers Brain Germinal Matrix brain
40 chr4:22239600-22240600 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr4:22239600-22240600 Enhancers iPS-20b Cell Line embryonic stem cell

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