Variant report

Variant	rs613497
Chromosome Location	chr6:50028997-50028998
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs13201512	1.00[JPT][hapmap]
rs13220707	1.00[JPT][hapmap]
rs614058	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs626858	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs627990	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs638963	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs678584	1.00[ASN][1000 genomes]
rs6905702	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs6916616	0.84[EUR][1000 genomes]
rs73739935	1.00[ASN][1000 genomes]
rs7764678	0.84[EUR][1000 genomes]
rs7772230	1.00[ASN][1000 genomes]
rs932741	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs9473680	1.00[JPT][hapmap]
rs9473708	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9473714	1.00[ASN][1000 genomes]
rs9473716	1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:50028600-50029000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr6:50028600-50029000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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