The 2.0 version of rSNPBase

Variant report

Variant rs61351720
Chromosome Location chr2:233941280-233941281
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233937600-233943800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr2:233937600-233946400 Genic enhancers Primary hematopoietic stem cells blood
3 chr2:233939000-233941800 Enhancers Sigmoid Colon Sigmoid Colon
4 chr2:233939200-233943000 Enhancers Fetal Thymus thymus
5 chr2:233939400-233942600 Enhancers Primary monocytes fromperipheralblood blood
6 chr2:233939600-233941600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
7 chr2:233939600-233941800 Enhancers Adipose Nuclei Adipose
8 chr2:233939600-233941800 Enhancers Rectal Mucosa Donor 31 rectum
9 chr2:233939600-233942000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr2:233939800-233941400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr2:233939800-233941600 Enhancers Brain Anterior Caudate brain
12 chr2:233939800-233941800 Flanking Active TSS Primary T cells from cord blood blood
13 chr2:233939800-233941800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr2:233940000-233941800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
15 chr2:233940000-233941800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
16 chr2:233940000-233941800 Enhancers Brain Hippocampus Middle brain
17 chr2:233940000-233942000 Enhancers HUVEC blood vessel
18 chr2:233940200-233941400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
19 chr2:233940200-233941800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr2:233940200-233941800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
21 chr2:233940200-233941800 Enhancers Brain Substantia Nigra brain
22 chr2:233940200-233941800 Flanking Active TSS GM12878-XiMat blood
23 chr2:233940400-233941400 Flanking Active TSS Primary B cells from cord blood blood
24 chr2:233940400-233941400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
25 chr2:233940400-233941400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
26 chr2:233940400-233941800 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr2:233940400-233945600 Weak transcription HepG2 liver
28 chr2:233940600-233941600 Enhancers Duodenum Mucosa Duodenum
29 chr2:233940600-233941800 Enhancers NHEK skin
30 chr2:233940600-233942000 Enhancers Dnd41 blood
31 chr2:233940600-233943800 Weak transcription Placenta Placenta
32 chr2:233940600-233944200 Weak transcription Gastric stomach
33 chr2:233940600-233945400 Weak transcription Colonic Mucosa Colon
34 chr2:233940600-233948000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr2:233940800-233941600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:233940800-233941600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:233940800-233941600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:233940800-233941800 Enhancers Duodenum Smooth Muscle Duodenum
39 chr2:233941000-233941800 Enhancers HMEC breast
40 chr2:233941000-233941800 Enhancers HSMM muscle
41 chr2:233941000-233943800 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr2:233941000-233943800 Weak transcription Lung lung
43 chr2:233941000-233944000 Genic enhancers Primary B cells from peripheral blood blood
44 chr2:233941000-233947600 Weak transcription Right Atrium heart
45 chr2:233941000-233947800 Weak transcription Esophagus oesophagus
46 chr2:233941200-233941400 Enhancers Rectal Mucosa Donor 29 rectum
47 chr2:233941200-233941600 Enhancers Primary T helper cells PMA-I stimulated --
48 chr2:233941200-233941600 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr2:233941200-233941600 Active TSS Primary Natural Killer cells fromperipheralblood blood
50 chr2:233941200-233941600 Active TSS Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015