Variant report

Variant rs61438236
Chromosome Location chr18:30047199-30047200
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:30031200-30048400 Weak transcription Fetal Muscle Leg muscle
2 chr18:30031400-30048200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr18:30033600-30048600 Weak transcription Aorta Aorta
4 chr18:30040600-30047400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr18:30040800-30047200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr18:30040800-30048200 Weak transcription Fetal Intestine Small intestine
7 chr18:30041400-30048200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr18:30041400-30048600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr18:30042000-30048200 Weak transcription Colon Smooth Muscle Colon
10 chr18:30042400-30048000 Weak transcription Fetal Kidney kidney
11 chr18:30042600-30047200 Weak transcription Brain Anterior Caudate brain
12 chr18:30042600-30047200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr18:30042600-30047800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr18:30043000-30048600 Weak transcription Esophagus oesophagus
15 chr18:30043400-30048600 Weak transcription Fetal Muscle Trunk muscle
16 chr18:30044000-30048200 Enhancers Liver Liver
17 chr18:30045000-30048200 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr18:30045000-30048200 Enhancers Fetal Brain Male brain
19 chr18:30045600-30048200 Weak transcription Ovary ovary
20 chr18:30045800-30048000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr18:30045800-30048200 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr18:30045800-30049400 Weak transcription H9 Cell Line embryonic stem cell
23 chr18:30046000-30048000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr18:30046000-30048000 Weak transcription HepG2 liver
25 chr18:30046000-30048600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr18:30046000-30049000 Weak transcription H1 Cell Line embryonic stem cell
27 chr18:30046400-30047200 Enhancers Fetal Heart heart
28 chr18:30046400-30048400 Enhancers Brain Substantia Nigra brain
29 chr18:30046600-30047200 Enhancers Sigmoid Colon Sigmoid Colon
30 chr18:30046600-30047400 Enhancers Psoas Muscle Psoas
31 chr18:30046600-30047400 Enhancers Right Ventricle heart
32 chr18:30046600-30048000 Enhancers Brain Cingulate Gyrus brain
33 chr18:30046800-30048200 Enhancers Brain Hippocampus Middle brain
34 chr18:30046800-30048200 Enhancers Stomach Mucosa stomach
35 chr18:30046800-30048400 Weak transcription Pancreas Pancrea
36 chr18:30047000-30047200 Enhancers Fetal Brain Female brain
37 chr18:30047000-30047200 Bivalent Enhancer Fetal Lung lung
38 chr18:30047000-30047400 Enhancers Brain Angular Gyrus brain
39 chr18:30047000-30047400 Enhancers Gastric stomach
40 chr18:30047000-30049000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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