The 2.0 version of rSNPBase

Variant report

Variant rs61548555
Chromosome Location chr5:126185521-126185522
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126148200-126193200 Weak transcription Brain Angular Gyrus brain
2 chr5:126158000-126204600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:126163800-126193200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr5:126170200-126186800 Weak transcription NHLF lung
5 chr5:126171200-126187000 Weak transcription NH-A brain
6 chr5:126172600-126187000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:126175200-126187400 Weak transcription Dnd41 blood
8 chr5:126175200-126189400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr5:126181600-126185600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:126181600-126185600 Enhancers Fetal Heart heart
11 chr5:126181800-126187200 Weak transcription GM12878-XiMat blood
12 chr5:126181800-126189200 Weak transcription Primary monocytes fromperipheralblood blood
13 chr5:126182000-126186800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr5:126182000-126187400 Weak transcription Fetal Intestine Small intestine
15 chr5:126182000-126190800 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr5:126182200-126186800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr5:126182400-126186800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr5:126182400-126187200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr5:126182400-126192600 Weak transcription Colon Smooth Muscle Colon
20 chr5:126182600-126186400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr5:126182600-126186600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr5:126182600-126187200 Weak transcription A549 lung
23 chr5:126182600-126187800 Weak transcription Primary B cells from cord blood blood
24 chr5:126182600-126187800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:126182600-126188200 Weak transcription Colonic Mucosa Colon
26 chr5:126182600-126193000 Weak transcription Right Ventricle heart
27 chr5:126182800-126185600 Enhancers HUES48 Cell Line embryonic stem cell
28 chr5:126182800-126186600 Weak transcription Primary T cells fromperipheralblood blood
29 chr5:126182800-126186600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr5:126182800-126186600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr5:126182800-126186600 Weak transcription Stomach Smooth Muscle stomach
32 chr5:126182800-126186800 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr5:126182800-126187600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:126182800-126187800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:126183000-126186600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr5:126183000-126186600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr5:126183200-126187400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:126183400-126188000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr5:126183600-126185600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr5:126183600-126187200 Weak transcription NHDF-Ad bronchial
41 chr5:126183600-126188600 Weak transcription Brain Cingulate Gyrus brain
42 chr5:126183600-126210400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr5:126183800-126186400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr5:126183800-126186600 Weak transcription Muscle Satellite Cultured Cells --
45 chr5:126183800-126186800 Weak transcription Psoas Muscle Psoas
46 chr5:126183800-126187200 Weak transcription Fetal Kidney kidney
47 chr5:126183800-126187200 Weak transcription HUVEC blood vessel
48 chr5:126183800-126187400 Weak transcription HSMM muscle
49 chr5:126183800-126187400 Weak transcription HSMMtube muscle
50 chr5:126183800-126188000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015