The 2.0 version of rSNPBase

Variant report

Variant rs61563447
Chromosome Location chr5:126306907-126306908
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126297800-126307400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr5:126299800-126312000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:126300400-126308200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr5:126301000-126307400 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr5:126301000-126308800 Weak transcription Small Intestine intestine
6 chr5:126301200-126308200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr5:126301600-126308000 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr5:126302000-126312400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr5:126304400-126308000 Enhancers Primary B cells from cord blood blood
10 chr5:126304400-126310600 Enhancers Primary B cells from peripheral blood blood
11 chr5:126304600-126307800 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr5:126305000-126309400 Enhancers Primary hematopoietic stem cells blood
13 chr5:126305200-126307400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:126305200-126307400 Enhancers Left Ventricle heart
15 chr5:126305200-126308000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:126305200-126308600 Enhancers Right Ventricle heart
17 chr5:126305200-126309000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:126305400-126307400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr5:126305400-126309200 Enhancers HUVEC blood vessel
20 chr5:126305600-126307600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr5:126305600-126308000 Weak transcription H1 Cell Line embryonic stem cell
22 chr5:126305600-126308000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr5:126305600-126308400 Enhancers Osteobl bone
24 chr5:126305800-126307400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr5:126305800-126307400 Enhancers Fetal Muscle Leg muscle
26 chr5:126305800-126308800 Enhancers Muscle Satellite Cultured Cells --
27 chr5:126306000-126307400 Enhancers Fetal Muscle Trunk muscle
28 chr5:126306000-126308000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr5:126306000-126308200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr5:126306000-126308200 Weak transcription Fetal Thymus thymus
31 chr5:126306000-126308400 Enhancers HSMMtube muscle
32 chr5:126306000-126308600 Enhancers Adipose Nuclei Adipose
33 chr5:126306000-126309000 Enhancers HSMM muscle
34 chr5:126306200-126308200 Enhancers NHDF-Ad bronchial
35 chr5:126306200-126308400 Enhancers NHLF lung
36 chr5:126306200-126308600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr5:126306200-126309000 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr5:126306200-126309400 Enhancers Brain Substantia Nigra brain
39 chr5:126306400-126307000 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr5:126306400-126307000 Enhancers Skeletal Muscle Male skeletal muscle
41 chr5:126306400-126307400 Enhancers Fetal Lung lung
42 chr5:126306400-126307400 Enhancers Psoas Muscle Psoas
43 chr5:126306400-126307800 Enhancers Monocytes-CD14+_RO01746 blood
44 chr5:126306400-126308000 Enhancers Primary T helper cells PMA-I stimulated --
45 chr5:126306400-126308200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr5:126306400-126308600 Enhancers Stomach Mucosa stomach
47 chr5:126306400-126309200 Enhancers Brain Hippocampus Middle brain
48 chr5:126306400-126317800 Weak transcription Ovary ovary
49 chr5:126306600-126307000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr5:126306600-126307200 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015