The 2.0 version of rSNPBase

Variant report

Variant rs73786300
Chromosome Location chr5:126347374-126347375
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126320800-126356000 Weak transcription H1 Cell Line embryonic stem cell
2 chr5:126334400-126363000 Weak transcription Ovary ovary
3 chr5:126334600-126351000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:126337600-126348600 Weak transcription Right Ventricle heart
5 chr5:126340200-126347600 Weak transcription Primary B cells from cord blood blood
6 chr5:126340600-126347600 Weak transcription Primary T cells from cord blood blood
7 chr5:126340600-126348800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr5:126340800-126347600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr5:126343000-126347400 Weak transcription Primary hematopoietic stem cells blood
10 chr5:126343000-126347400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr5:126343800-126349600 Enhancers Fetal Heart heart
12 chr5:126344600-126349400 Enhancers HSMMtube muscle
13 chr5:126345200-126349000 Enhancers Muscle Satellite Cultured Cells --
14 chr5:126345200-126349600 Enhancers Osteobl bone
15 chr5:126345400-126347800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr5:126345400-126347800 Enhancers Right Atrium heart
17 chr5:126345400-126347800 Enhancers Skeletal Muscle Female skeletal muscle
18 chr5:126345400-126349000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:126345400-126349400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:126345400-126350200 Enhancers Primary B cells from peripheral blood blood
21 chr5:126345600-126347400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr5:126345600-126348400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr5:126345600-126348400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr5:126345600-126349400 Enhancers HSMM muscle
25 chr5:126345600-126349400 Enhancers NHDF-Ad bronchial
26 chr5:126345600-126362400 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr5:126345800-126348200 Enhancers Skeletal Muscle Male skeletal muscle
28 chr5:126345800-126348800 Weak transcription Small Intestine intestine
29 chr5:126345800-126351000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:126346000-126348000 Weak transcription Brain Cingulate Gyrus brain
31 chr5:126346000-126348600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr5:126346000-126349200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr5:126346000-126349400 Enhancers NH-A brain
34 chr5:126346200-126351400 Weak transcription Left Ventricle heart
35 chr5:126346400-126348600 Weak transcription Brain Hippocampus Middle brain
36 chr5:126346600-126347800 Enhancers Cortex derived primary cultured neurospheres brain
37 chr5:126346800-126347800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:126346800-126347800 Enhancers K562 blood
39 chr5:126346800-126348800 Enhancers HUVEC blood vessel
40 chr5:126346800-126349000 Enhancers NHLF lung
41 chr5:126346800-126349200 Enhancers HMEC breast
42 chr5:126347000-126347800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr5:126347000-126347800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr5:126347000-126347800 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr5:126347000-126347800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr5:126347000-126347800 Enhancers Brain Anterior Caudate brain
47 chr5:126347000-126347800 Enhancers Fetal Muscle Leg muscle
48 chr5:126347000-126348000 Flanking Active TSS GM12878-XiMat blood
49 chr5:126347000-126348600 Enhancers Brain Angular Gyrus brain
50 chr5:126347000-126349200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015