Variant report

Variant	rs61745654
Chromosome Location	chr1:192467377-192467378
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12588653	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12590427	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1593376	0.84[ASN][1000 genomes]
rs2162125	0.96[ASN][1000 genomes]
rs2296918	0.93[ASN][1000 genomes]
rs4899340	0.95[ASN][1000 genomes]
rs4902794	0.96[ASN][1000 genomes]
rs59398189	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59507789	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61654805	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61740021	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7149733	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7153452	0.96[ASN][1000 genomes]
rs73280734	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73280744	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:192459800-192469600	Weak transcription	NHLF	lung
2	chr1:192466000-192467600	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr1:192467200-192467400	Enhancers	Stomach Smooth Muscle	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links