Variant report
| Variant | rs61772618 |
|---|---|
| Chromosome Location | chr1:56998485-56998486 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:56967000-57002000 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 2 | chr1:56977800-56999200 | Weak transcription | A549 | lung |
| 3 | chr1:56983400-57000800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr1:56987000-57015000 | Genic enhancers | NHDF-Ad | bronchial |
| 5 | chr1:56990000-57004000 | Genic enhancers | Liver | Liver |
| 6 | chr1:56990200-56998600 | Enhancers | Brain Substantia Nigra | brain |
| 7 | chr1:56992000-57001200 | Weak transcription | Spleen | Spleen |
| 8 | chr1:56992800-56998600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 9 | chr1:56992800-56998800 | Weak transcription | Gastric | stomach |
| 10 | chr1:56992800-57011200 | Weak transcription | Stomach Mucosa | stomach |
| 11 | chr1:56993000-56998800 | Enhancers | Ovary | ovary |
| 12 | chr1:56993000-56999800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 13 | chr1:56993000-57004600 | Weak transcription | Hela-S3 | cervix |
| 14 | chr1:56993200-57001400 | Enhancers | Right Atrium | heart |
| 15 | chr1:56993600-57007800 | Weak transcription | Primary B cells from cord blood | blood |
| 16 | chr1:56993800-57004200 | Weak transcription | NH-A | brain |
| 17 | chr1:56994000-56998600 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr1:56994000-56999000 | Weak transcription | Aorta | Aorta |
| 19 | chr1:56994000-57000000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 20 | chr1:56994000-57001200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr1:56994000-57004000 | Weak transcription | HUVEC | blood vessel |
| 22 | chr1:56994000-57012400 | Weak transcription | Fetal Brain Male | brain |
| 23 | chr1:56994000-57012800 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr1:56994200-56998800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr1:56994200-56999400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr1:56994200-57001200 | Weak transcription | Dnd41 | blood |
| 27 | chr1:56994200-57004400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr1:56994400-57002600 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 29 | chr1:56994600-56999600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr1:56994600-56999800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr1:56994800-56999000 | Genic enhancers | Cortex derived primary cultured neurospheres | brain |
| 32 | chr1:56995000-57003400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 33 | chr1:56995000-57003600 | Strong transcription | Osteobl | bone |
| 34 | chr1:56995200-56999800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 35 | chr1:56995200-57000000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr1:56995200-57003800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr1:56995600-57000000 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr1:56995600-57004600 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr1:56995800-56998800 | Enhancers | Fetal Heart | heart |
| 40 | chr1:56995800-56999200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 41 | chr1:56995800-57004000 | Genic enhancers | HepG2 | liver |
| 42 | chr1:56996000-57001200 | Enhancers | Right Ventricle | heart |
| 43 | chr1:56996000-57002800 | Genic enhancers | HUES64 Cell Line | embryonic stem cell |
| 44 | chr1:56996200-57003000 | Genic enhancers | H1 Cell Line | embryonic stem cell |
| 45 | chr1:56996200-57003000 | Genic enhancers | HUES6 Cell Line | embryonic stem cell |
| 46 | chr1:56996200-57003000 | Genic enhancers | iPS-18 Cell Line | embryonic stem cell |
| 47 | chr1:56996400-56999400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr1:56996400-57000200 | Genic enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 49 | chr1:56996600-56998600 | Enhancers | H9 Cell Line | embryonic stem cell |
| 50 | chr1:56996600-56999400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
