The 2.0 version of rSNPBase

Variant report

Variant rs61772630
Chromosome Location chr1:95427503-95427504
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
2 chr1:95415800-95428400 Weak transcription Lung lung
3 chr1:95421600-95428200 Weak transcription Aorta Aorta
4 chr1:95421600-95428200 Weak transcription Fetal Kidney kidney
5 chr1:95421600-95429200 Weak transcription Fetal Muscle Trunk muscle
6 chr1:95421600-95429600 Weak transcription Spleen Spleen
7 chr1:95421800-95427600 Weak transcription Brain Hippocampus Middle brain
8 chr1:95421800-95427600 Weak transcription Fetal Lung lung
9 chr1:95421800-95428200 Weak transcription Right Ventricle heart
10 chr1:95421800-95428200 Weak transcription Stomach Smooth Muscle stomach
11 chr1:95421800-95428400 Weak transcription Left Ventricle heart
12 chr1:95422000-95427600 Weak transcription Colon Smooth Muscle Colon
13 chr1:95422000-95428200 Weak transcription Rectal Smooth Muscle rectum
14 chr1:95422000-95428600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:95422800-95428600 Weak transcription Esophagus oesophagus
17 chr1:95423600-95428200 Weak transcription Fetal Heart heart
18 chr1:95425800-95427600 Enhancers HepG2 liver
19 chr1:95426000-95428000 Enhancers Primary B cells from peripheral blood blood
20 chr1:95426000-95428200 Enhancers Placenta Placenta
21 chr1:95426200-95427800 Enhancers Primary B cells from cord blood blood
22 chr1:95426200-95428200 Enhancers Fetal Muscle Leg muscle
23 chr1:95426200-95428200 Enhancers Fetal Thymus thymus
24 chr1:95426400-95428200 Weak transcription Small Intestine intestine
25 chr1:95426400-95428400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:95426600-95427600 Enhancers Rectal Mucosa Donor 29 rectum
27 chr1:95426600-95428000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:95426600-95428200 Enhancers Primary monocytes fromperipheralblood blood
29 chr1:95426800-95428000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:95426800-95428000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:95426800-95428000 Enhancers Primary T cells from cord blood blood
32 chr1:95426800-95428000 Enhancers Primary hematopoietic stem cells blood
33 chr1:95426800-95428000 Enhancers Primary T helper cells PMA-I stimulated --
34 chr1:95426800-95428000 Enhancers Primary T helper cells fromperipheralblood blood
35 chr1:95426800-95428000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:95426800-95428000 Enhancers Adipose Nuclei Adipose
37 chr1:95426800-95428000 Enhancers Monocytes-CD14+_RO01746 blood
38 chr1:95426800-95428200 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:95426800-95428200 Enhancers Liver Liver
40 chr1:95426800-95428200 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr1:95427000-95428000 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr1:95427000-95428000 Enhancers Duodenum Mucosa Duodenum
43 chr1:95427000-95428200 Weak transcription Psoas Muscle Psoas
44 chr1:95427000-95428200 Enhancers Dnd41 blood
45 chr1:95427000-95429200 Enhancers Fetal Intestine Small intestine
46 chr1:95427200-95428200 Enhancers Stomach Mucosa stomach
47 chr1:95427400-95428000 Enhancers Duodenum Smooth Muscle Duodenum
48 chr1:95427400-95428000 Enhancers Rectal Mucosa Donor 31 rectum
49 chr1:95427400-95428200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:95427400-95428200 Enhancers A549 lung

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Last update: Aug 31, 2015