The 2.0 version of rSNPBase

Variant report

Variant rs61801562
Chromosome Location chr1:160548091-160548092
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160542800-160548200 Enhancers Fetal Thymus thymus
2 chr1:160543000-160548600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr1:160543400-160548400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr1:160544200-160548400 Flanking Active TSS GM12878-XiMat blood
5 chr1:160544800-160549200 Active TSS Rectal Mucosa Donor 29 rectum
6 chr1:160545800-160549000 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr1:160546000-160549800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr1:160546400-160548200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
9 chr1:160546400-160549400 Active TSS Primary T cells fromperipheralblood blood
10 chr1:160546600-160549800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:160546800-160548400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
12 chr1:160546800-160549800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
13 chr1:160547000-160548600 Flanking Active TSS Primary B cells from cord blood blood
14 chr1:160547000-160549600 Active TSS Adipose Nuclei Adipose
15 chr1:160547200-160549000 Active TSS Primary Natural Killer cells fromperipheralblood blood
16 chr1:160547200-160549200 Active TSS Fetal Muscle Leg muscle
17 chr1:160547200-160549400 Active TSS Primary T regulatory cells fromperipheralblood blood
18 chr1:160547200-160549600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:160547400-160549000 Active TSS Duodenum Mucosa Duodenum
20 chr1:160547400-160549200 Active TSS Brain Hippocampus Middle brain
21 chr1:160547400-160549400 Flanking Active TSS Primary T cells from cord blood blood
22 chr1:160547600-160548200 Active TSS Brain Anterior Caudate brain
23 chr1:160547600-160548400 Flanking Active TSS Primary monocytes fromperipheralblood blood
24 chr1:160547600-160548800 Active TSS Primary T helper 17 cells PMA-I stimulated --
25 chr1:160547600-160549000 Weak transcription Rectal Smooth Muscle rectum
26 chr1:160547600-160549400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
27 chr1:160547600-160549600 Active TSS Thymus Thymus
28 chr1:160547800-160549400 Active TSS Primary T killer memory cells from peripheral blood blood
29 chr1:160548000-160548200 Active TSS Primary hematopoietic stem cells blood
30 chr1:160548000-160548400 Flanking Active TSS Primary B cells from peripheral blood blood
31 chr1:160548000-160548400 Active TSS Rectal Mucosa Donor 31 rectum
32 chr1:160548000-160548400 Active TSS Sigmoid Colon Sigmoid Colon
33 chr1:160548000-160549200 Active TSS Primary T helper naive cells from peripheral blood blood
34 chr1:160548000-160549200 Active TSS Liver Liver
35 chr1:160548000-160549400 Active TSS Primary T helper memory cells from peripheral blood 1 blood
36 chr1:160548000-160549400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:160548000-160549400 Active TSS Duodenum Smooth Muscle Duodenum
38 chr1:160548000-160549400 Flanking Active TSS K562 blood
39 chr1:160548000-160549600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
40 chr1:160548000-160549800 Flanking Active TSS Dnd41 blood

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Last update: Aug 31, 2015