The 2.0 version of rSNPBase

Variant report

Variant rs61805738
Chromosome Location chr1:153591876-153591877
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:153585600-153592200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:153585600-153596400 Weak transcription Brain Hippocampus Middle brain
3 chr1:153585600-153597600 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:153585600-153598800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:153585600-153599000 Weak transcription Aorta Aorta
6 chr1:153585800-153599200 Weak transcription Fetal Brain Male brain
7 chr1:153586000-153595600 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr1:153586000-153596200 Weak transcription Fetal Kidney kidney
9 chr1:153586000-153598800 Weak transcription Psoas Muscle Psoas
10 chr1:153588600-153598800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:153589000-153596200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:153589200-153595200 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr1:153589200-153599400 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr1:153589400-153595400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:153589400-153596400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:153589400-153598600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:153589600-153597800 Weak transcription HepG2 liver
18 chr1:153590000-153592400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:153590000-153598600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:153590200-153592800 Weak transcription Fetal Intestine Large intestine
21 chr1:153590200-153593000 Weak transcription Fetal Lung lung
22 chr1:153590200-153596200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:153590400-153593400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:153590400-153593400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:153590400-153595000 Weak transcription Rectal Smooth Muscle rectum
26 chr1:153590400-153596200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:153590400-153596200 Strong transcription Osteobl bone
28 chr1:153590400-153596400 Weak transcription Liver Liver
29 chr1:153590400-153596400 Weak transcription Right Ventricle heart
30 chr1:153590400-153596400 Weak transcription Spleen Spleen
31 chr1:153590400-153597800 Weak transcription Right Atrium heart
32 chr1:153590400-153598200 Weak transcription Colonic Mucosa Colon
33 chr1:153590400-153598200 Weak transcription Pancreas Pancrea
34 chr1:153590400-153598600 Weak transcription Brain Anterior Caudate brain
35 chr1:153590400-153598600 Weak transcription Esophagus oesophagus
36 chr1:153590400-153598600 Weak transcription Gastric stomach
37 chr1:153590400-153598600 Weak transcription K562 blood
38 chr1:153590600-153592000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:153590600-153592600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:153590600-153593200 Strong transcription Adipose Nuclei Adipose
41 chr1:153590600-153593200 Strong transcription Stomach Smooth Muscle stomach
42 chr1:153590600-153593400 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr1:153590600-153593400 Strong transcription Fetal Muscle Trunk muscle
44 chr1:153590600-153595000 Weak transcription HUVEC blood vessel
45 chr1:153590600-153595200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:153590600-153595200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:153590600-153595200 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:153590600-153595400 Weak transcription Primary B cells from peripheral blood blood
49 chr1:153590600-153596200 Weak transcription Brain Substantia Nigra brain
50 chr1:153590600-153596200 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015