The 2.0 version of rSNPBase

Variant report

Variant rs61807813
Chromosome Location chr1:169760472-169760473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169749400-169761400 Weak transcription Liver Liver
2 chr1:169750800-169762800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:169751600-169762600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:169753600-169763000 Weak transcription HMEC breast
5 chr1:169754400-169760800 Weak transcription Dnd41 blood
6 chr1:169756400-169761000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:169756400-169762400 Weak transcription Fetal Brain Male brain
8 chr1:169756600-169762600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:169757000-169762400 Weak transcription Fetal Thymus thymus
10 chr1:169757400-169763000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:169757400-169763000 Weak transcription Thymus Thymus
12 chr1:169757400-169763200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:169757600-169762200 Weak transcription Fetal Intestine Small intestine
14 chr1:169757600-169763000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:169758000-169762800 Weak transcription Primary B cells from cord blood blood
16 chr1:169758200-169761200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:169758200-169763200 Weak transcription Adipose Nuclei Adipose
18 chr1:169758200-169763200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:169758400-169761600 Weak transcription HepG2 liver
20 chr1:169758600-169763000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:169758600-169763200 Weak transcription Brain Hippocampus Middle brain
22 chr1:169758600-169763200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:169758600-169763400 Weak transcription Gastric stomach
24 chr1:169758800-169762200 Weak transcription Aorta Aorta
25 chr1:169758800-169762400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:169758800-169763000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:169758800-169763000 Weak transcription Rectal Smooth Muscle rectum
28 chr1:169758800-169763200 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:169758800-169763200 Weak transcription HSMM muscle
30 chr1:169758800-169763600 Weak transcription Spleen Spleen
31 chr1:169759000-169760600 Weak transcription Primary hematopoietic stem cells blood
32 chr1:169759000-169761000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr1:169759000-169762600 Weak transcription Brain Germinal Matrix brain
34 chr1:169759000-169762800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:169759000-169763000 Weak transcription Duodenum Mucosa Duodenum
36 chr1:169759000-169763000 Weak transcription A549 lung
37 chr1:169759200-169761000 Weak transcription Fetal Kidney kidney
38 chr1:169759200-169761400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:169759200-169763000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:169759200-169763200 Weak transcription Ovary ovary
41 chr1:169759200-169763200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:169759400-169762600 Weak transcription Brain Anterior Caudate brain
43 chr1:169759400-169763000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:169759600-169763000 Weak transcription Brain Substantia Nigra brain
45 chr1:169759600-169763200 Weak transcription Pancreas Pancrea
46 chr1:169759800-169763200 Weak transcription Fetal Intestine Large intestine
47 chr1:169759800-169763200 Weak transcription Stomach Smooth Muscle stomach
48 chr1:169760000-169761400 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr1:169760000-169763000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:169760200-169761600 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015