The 2.0 version of rSNPBase

Variant report

Variant rs61821383
Chromosome Location chr1:214565066-214565067
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214519200-214577200 Weak transcription Primary hematopoietic stem cells blood
2 chr1:214524400-214574400 Weak transcription Brain Hippocampus Middle brain
3 chr1:214529000-214584200 Weak transcription Brain Anterior Caudate brain
4 chr1:214537600-214577000 Weak transcription Stomach Mucosa stomach
5 chr1:214541600-214566600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:214546200-214576000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:214546200-214576200 Weak transcription Right Atrium heart
8 chr1:214547800-214576200 Weak transcription Fetal Heart heart
9 chr1:214554000-214568200 Weak transcription Liver Liver
10 chr1:214554000-214577800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:214554200-214577800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:214556000-214576000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr1:214556800-214573400 Weak transcription Fetal Kidney kidney
14 chr1:214557600-214568600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:214557800-214566600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:214557800-214576200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:214557800-214578000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:214557800-214589000 Weak transcription Rectal Smooth Muscle rectum
19 chr1:214558000-214565400 Weak transcription Aorta Aorta
20 chr1:214558000-214565800 Weak transcription A549 lung
21 chr1:214558000-214566000 Weak transcription Lung lung
22 chr1:214558000-214566000 Weak transcription Spleen Spleen
23 chr1:214558000-214566200 Weak transcription HepG2 liver
24 chr1:214558000-214567200 Weak transcription Fetal Lung lung
25 chr1:214558000-214576600 Weak transcription Duodenum Mucosa Duodenum
26 chr1:214558000-214578200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:214558200-214566400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:214558200-214570600 Weak transcription Dnd41 blood
29 chr1:214558200-214584000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:214558400-214565200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:214558400-214565800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:214558600-214565800 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:214558600-214569000 Weak transcription Psoas Muscle Psoas
34 chr1:214560000-214592000 Weak transcription Hela-S3 cervix
35 chr1:214560400-214566000 Weak transcription Gastric stomach
36 chr1:214560400-214566000 Weak transcription NHLF lung
37 chr1:214560400-214576600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:214560600-214576000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:214560800-214568200 Strong transcription HSMM muscle
40 chr1:214560800-214576000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:214561000-214566600 Weak transcription Fetal Intestine Small intestine
42 chr1:214561200-214565800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:214561200-214566000 Weak transcription Placenta Placenta
44 chr1:214562400-214568200 Strong transcription Muscle Satellite Cultured Cells --
45 chr1:214562400-214568200 Strong transcription HMEC breast
46 chr1:214562800-214566000 Weak transcription Colon Smooth Muscle Colon
47 chr1:214562800-214568200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:214563000-214575600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:214563200-214567600 Strong transcription Adipose Nuclei Adipose
50 chr1:214563200-214568000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015