Variant report

Variant rs61828290
Chromosome Location chr1:180136975-180136976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180124800-180151000 Weak transcription Aorta Aorta
2 chr1:180125200-180137400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:180125200-180150400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:180126000-180151000 Weak transcription Primary B cells from peripheral blood blood
6 chr1:180126000-180151400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr1:180126200-180152400 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:180126400-180153800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr1:180127200-180137400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:180127200-180140400 Weak transcription GM12878-XiMat blood
11 chr1:180127400-180142800 Weak transcription HSMM muscle
12 chr1:180127600-180137400 Weak transcription K562 blood
13 chr1:180127600-180142600 Weak transcription Rectal Smooth Muscle rectum
14 chr1:180127800-180137200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:180128600-180137000 Weak transcription Fetal Intestine Large intestine
16 chr1:180130000-180137000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:180132800-180140600 Enhancers Stomach Mucosa stomach
18 chr1:180133000-180137200 Enhancers Right Ventricle heart
19 chr1:180133000-180138000 Enhancers Pancreas Pancrea
20 chr1:180133000-180138200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:180133000-180139400 Enhancers Left Ventricle heart
22 chr1:180133000-180143800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:180133200-180139400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:180133400-180153200 Weak transcription Primary hematopoietic stem cells blood
25 chr1:180133800-180152800 Weak transcription Primary B cells from cord blood blood
26 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:180134200-180137400 Enhancers HSMMtube muscle
28 chr1:180134200-180138800 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr1:180134400-180137000 Genic enhancers Fetal Brain Female brain
30 chr1:180134400-180137000 Enhancers Ovary ovary
31 chr1:180134400-180139000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:180134400-180139600 Genic enhancers Gastric stomach
33 chr1:180134400-180140600 Genic enhancers Lung lung
34 chr1:180134400-180141000 Enhancers Right Atrium heart
35 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
36 chr1:180134600-180137200 Genic enhancers Fetal Stomach stomach
37 chr1:180134600-180138400 Enhancers HUES6 Cell Line embryonic stem cell
38 chr1:180134600-180138800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:180134600-180138800 Genic enhancers Esophagus oesophagus
40 chr1:180134600-180139000 Genic enhancers Fetal Lung lung
41 chr1:180134800-180137200 Enhancers Cortex derived primary cultured neurospheres brain
42 chr1:180134800-180137600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:180134800-180140200 Enhancers Placenta Amnion Placenta Amnion
44 chr1:180135000-180137200 Enhancers Fetal Brain Male brain
45 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr1:180135400-180137000 Genic enhancers Fetal Muscle Leg muscle
47 chr1:180135400-180138000 Genic enhancers Duodenum Mucosa Duodenum
48 chr1:180135400-180138400 Strong transcription NHDF-Ad bronchial
49 chr1:180135400-180139200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:180135400-180140200 Strong transcription Primary neutrophils fromperipheralblood blood

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