Variant report

Variant rs61828295
Chromosome Location chr1:180139631-180139632
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180124800-180151000 Weak transcription Aorta Aorta
2 chr1:180125200-180150400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:180126000-180151000 Weak transcription Primary B cells from peripheral blood blood
5 chr1:180126000-180151400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:180126200-180152400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:180126400-180153800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:180127200-180140400 Weak transcription GM12878-XiMat blood
9 chr1:180127400-180142800 Weak transcription HSMM muscle
10 chr1:180127600-180142600 Weak transcription Rectal Smooth Muscle rectum
11 chr1:180132800-180140600 Enhancers Stomach Mucosa stomach
12 chr1:180133000-180143800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:180133400-180153200 Weak transcription Primary hematopoietic stem cells blood
14 chr1:180133800-180152800 Weak transcription Primary B cells from cord blood blood
15 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:180134400-180140600 Genic enhancers Lung lung
17 chr1:180134400-180141000 Enhancers Right Atrium heart
18 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
19 chr1:180134800-180140200 Enhancers Placenta Amnion Placenta Amnion
20 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr1:180135400-180140200 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr1:180135800-180139800 Enhancers Rectal Mucosa Donor 29 rectum
23 chr1:180135800-180141200 Strong transcription Primary T cells from cord blood blood
24 chr1:180136200-180167200 Weak transcription Dnd41 blood
25 chr1:180136400-180140800 Strong transcription Osteobl bone
26 chr1:180136400-180142800 Weak transcription Adipose Nuclei Adipose
27 chr1:180136400-180142800 Weak transcription Brain Anterior Caudate brain
28 chr1:180136400-180145400 Weak transcription NH-A brain
29 chr1:180136600-180140200 Enhancers Fetal Heart heart
30 chr1:180136600-180140200 Enhancers HMEC breast
31 chr1:180136800-180140000 Genic enhancers Fetal Intestine Small intestine
32 chr1:180136800-180140600 Enhancers HepG2 liver
33 chr1:180136800-180141200 Strong transcription Muscle Satellite Cultured Cells --
34 chr1:180136800-180142600 Weak transcription Brain Substantia Nigra brain
35 chr1:180136800-180142800 Weak transcription Brain Cingulate Gyrus brain
36 chr1:180137000-180140000 Enhancers Fetal Intestine Large intestine
37 chr1:180137000-180141600 Strong transcription Fetal Brain Female brain
38 chr1:180137000-180142600 Weak transcription Colon Smooth Muscle Colon
39 chr1:180137000-180142600 Weak transcription Fetal Muscle Leg muscle
40 chr1:180137200-180140200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:180137200-180142200 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:180137200-180142800 Weak transcription Fetal Brain Male brain
43 chr1:180137200-180143000 Strong transcription Fetal Stomach stomach
44 chr1:180137200-180148800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:180137200-180153200 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:180137200-180155400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:180137400-180139800 Enhancers Colonic Mucosa Colon
48 chr1:180137400-180157800 Weak transcription HSMMtube muscle
49 chr1:180137600-180141200 Strong transcription NHLF lung
50 chr1:180137600-180142600 Weak transcription Brain Inferior Temporal Lobe brain

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