Variant report

Variant rs73040466
Chromosome Location chr1:180160552-180160553
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
3 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr1:180136200-180167200 Weak transcription Dnd41 blood
5 chr1:180138200-180172800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:180140200-180167200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:180143400-180171600 Strong transcription Fetal Stomach stomach
8 chr1:180143800-180169000 Weak transcription Small Intestine intestine
9 chr1:180143800-180170000 Strong transcription Osteobl bone
10 chr1:180144000-180166800 Weak transcription Psoas Muscle Psoas
11 chr1:180144200-180166400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:180144600-180168400 Strong transcription Ovary ovary
13 chr1:180144800-180161600 Strong transcription Placenta Placenta
14 chr1:180145200-180160800 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr1:180146400-180164000 Weak transcription Right Atrium heart
16 chr1:180147800-180166000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:180148000-180165400 Strong transcription NHEK skin
18 chr1:180148000-180168400 Strong transcription Stomach Smooth Muscle stomach
19 chr1:180148200-180161400 Strong transcription Rectal Mucosa Donor 31 rectum
20 chr1:180148200-180162800 Strong transcription Sigmoid Colon Sigmoid Colon
21 chr1:180148600-180168800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:180150200-180161200 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr1:180150200-180171200 Strong transcription NHLF lung
24 chr1:180150400-180161200 Strong transcription Left Ventricle heart
25 chr1:180150400-180162400 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr1:180150400-180168800 Strong transcription Lung lung
27 chr1:180150600-180161200 Strong transcription Primary hematopoietic stem cells short term culture blood
28 chr1:180150600-180167400 Strong transcription Adipose Nuclei Adipose
29 chr1:180150800-180167800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:180150800-180168200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:180151000-180161400 Strong transcription Colonic Mucosa Colon
32 chr1:180151000-180161600 Strong transcription Duodenum Mucosa Duodenum
33 chr1:180151000-180162400 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr1:180151000-180162400 Strong transcription Gastric stomach
35 chr1:180151000-180167200 Strong transcription Primary T cells from cord blood blood
36 chr1:180151000-180167400 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr1:180151000-180167400 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr1:180151000-180167800 Strong transcription Right Ventricle heart
39 chr1:180151000-180168200 Strong transcription Pancreas Pancrea
40 chr1:180151000-180168400 Strong transcription Esophagus oesophagus
41 chr1:180151000-180168400 Strong transcription Fetal Intestine Small intestine
42 chr1:180151000-180168600 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr1:180151400-180160800 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:180151800-180166800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:180152000-180162600 Strong transcription Fetal Intestine Large intestine
46 chr1:180152000-180165400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:180152200-180160800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:180152200-180162200 Weak transcription Fetal Kidney kidney
49 chr1:180152200-180166000 Strong transcription Brain Anterior Caudate brain
50 chr1:180153000-180161800 Strong transcription Brain Angular Gyrus brain

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