Variant report

Variant rs12082209
Chromosome Location chr1:180138010-180138011
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180124800-180151000 Weak transcription Aorta Aorta
2 chr1:180125200-180150400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:180125600-180159200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:180126000-180151000 Weak transcription Primary B cells from peripheral blood blood
5 chr1:180126000-180151400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:180126200-180152400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:180126400-180153800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:180127200-180140400 Weak transcription GM12878-XiMat blood
9 chr1:180127400-180142800 Weak transcription HSMM muscle
10 chr1:180127600-180142600 Weak transcription Rectal Smooth Muscle rectum
11 chr1:180132800-180140600 Enhancers Stomach Mucosa stomach
12 chr1:180133000-180138200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:180133000-180139400 Enhancers Left Ventricle heart
14 chr1:180133000-180143800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:180133200-180139400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:180133400-180153200 Weak transcription Primary hematopoietic stem cells blood
17 chr1:180133800-180152800 Weak transcription Primary B cells from cord blood blood
18 chr1:180134000-180167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:180134200-180138800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr1:180134400-180139000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:180134400-180139600 Genic enhancers Gastric stomach
22 chr1:180134400-180140600 Genic enhancers Lung lung
23 chr1:180134400-180141000 Enhancers Right Atrium heart
24 chr1:180134400-180168800 Strong transcription Primary monocytes fromperipheralblood blood
25 chr1:180134600-180138400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr1:180134600-180138800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:180134600-180138800 Genic enhancers Esophagus oesophagus
28 chr1:180134600-180139000 Genic enhancers Fetal Lung lung
29 chr1:180134800-180140200 Enhancers Placenta Amnion Placenta Amnion
30 chr1:180135000-180169000 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr1:180135400-180138400 Strong transcription NHDF-Ad bronchial
32 chr1:180135400-180139200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:180135400-180140200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr1:180135600-180138200 Enhancers iPS-15b Cell Line embryonic stem cell
35 chr1:180135600-180138200 Strong transcription Primary T cells fromperipheralblood blood
36 chr1:180135600-180138400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr1:180135600-180138600 Enhancers H1 Cell Line embryonic stem cell
38 chr1:180135600-180138800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:180135600-180139200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:180135800-180139400 Genic enhancers NHEK skin
41 chr1:180135800-180139800 Enhancers Rectal Mucosa Donor 29 rectum
42 chr1:180135800-180141200 Strong transcription Primary T cells from cord blood blood
43 chr1:180136200-180138200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:180136200-180138200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:180136200-180138200 Weak transcription Small Intestine intestine
46 chr1:180136200-180167200 Weak transcription Dnd41 blood
47 chr1:180136400-180138200 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr1:180136400-180138200 Genic enhancers Placenta Placenta
49 chr1:180136400-180139200 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr1:180136400-180140800 Strong transcription Osteobl bone

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