The 2.0 version of rSNPBase

Variant report

Variant rs61835658
Chromosome Location chr1:226986857-226986858
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226983600-226988600 Enhancers Primary Natural Killer cells fromperipheralblood blood
2 chr1:226984400-226989200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr1:226984800-226987600 Enhancers K562 blood
4 chr1:226985000-226988200 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr1:226985000-226988800 Enhancers Fetal Thymus thymus
6 chr1:226985000-226990000 Enhancers Primary T cells from cord blood blood
7 chr1:226985400-226987200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:226986000-226987200 Enhancers Fetal Intestine Large intestine
9 chr1:226986000-226987800 Enhancers Primary mononuclear cells fromperipheralblood Blood
10 chr1:226986000-226988600 Enhancers Thymus Thymus
11 chr1:226986200-226987200 Enhancers Primary B cells from cord blood blood
12 chr1:226986200-226987200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
13 chr1:226986200-226987200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
14 chr1:226986200-226987400 Enhancers Primary B cells from peripheral blood blood
15 chr1:226986200-226987400 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:226986200-226987400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
17 chr1:226986200-226987400 Enhancers Duodenum Mucosa Duodenum
18 chr1:226986200-226987800 Enhancers Fetal Muscle Leg muscle
19 chr1:226986400-226987000 Flanking Active TSS Primary T cells fromperipheralblood blood
20 chr1:226986400-226987000 Enhancers Stomach Smooth Muscle stomach
21 chr1:226986400-226987200 Enhancers Right Atrium heart
22 chr1:226986400-226987400 Enhancers Adipose Nuclei Adipose
23 chr1:226986400-226987400 Enhancers Colonic Mucosa Colon
24 chr1:226986400-226987400 Enhancers Left Ventricle heart
25 chr1:226986400-226987400 Enhancers Lung lung
26 chr1:226986400-226987400 Enhancers Spleen Spleen
27 chr1:226986400-226987600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:226986400-226987800 Enhancers Rectal Mucosa Donor 29 rectum
29 chr1:226986400-226989200 Enhancers Colon Smooth Muscle Colon
30 chr1:226986600-226987000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:226986600-226987200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:226986600-226987400 Enhancers Esophagus oesophagus
33 chr1:226986600-226987600 Bivalent Enhancer Fetal Muscle Trunk muscle
34 chr1:226986600-226987800 Enhancers Skeletal Muscle Male skeletal muscle
35 chr1:226986800-226987000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr1:226986800-226987000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
37 chr1:226986800-226987000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
38 chr1:226986800-226987200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
39 chr1:226986800-226987400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr1:226986800-226987600 Enhancers Placenta Placenta
41 chr1:226986800-226988000 Enhancers HUVEC blood vessel
42 chr1:226986800-226988400 Weak transcription Fetal Intestine Small intestine
43 chr1:226986800-226988800 Enhancers Fetal Stomach stomach
44 chr1:226986800-226988800 Enhancers Rectal Smooth Muscle rectum
45 chr1:226986800-226988800 Enhancers GM12878-XiMat blood
46 chr1:226986800-226989000 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015