Variant report

Variant	rs61842437
Chromosome Location	chr10:18428102-18428103
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12572404	0.87[EUR][1000 genomes]
rs55822580	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57831826	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58055243	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60689569	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60858250	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61545603	0.93[EUR][1000 genomes]
rs61842427	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61842428	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61842432	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61842434	0.96[ASN][1000 genomes]
rs61842438	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18424200-18428800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr10:18425000-18428600	Weak transcription	Colon Smooth Muscle	Colon
3	chr10:18425000-18428600	Weak transcription	Fetal Heart	heart
4	chr10:18425200-18428600	Weak transcription	Rectal Smooth Muscle	rectum
5	chr10:18425400-18428400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr10:18425600-18428800	Weak transcription	Brain Anterior Caudate	brain
7	chr10:18425800-18428600	Weak transcription	Brain Substantia Nigra	brain
8	chr10:18425800-18429000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr10:18426000-18428400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr10:18426000-18428600	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr10:18427600-18428400	Weak transcription	Stomach Smooth Muscle	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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