Variant report

Variant	rs61850980
Chromosome Location	chr1:211402175-211402176
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11577985	0.88[ASN][1000 genomes]
rs11581989	0.91[ASN][1000 genomes]
rs11590228	0.91[ASN][1000 genomes]
rs12071464	0.96[EUR][1000 genomes]
rs17017394	0.80[ASN][1000 genomes]
rs17017399	0.80[ASN][1000 genomes]
rs55758006	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55941941	0.88[ASN][1000 genomes]
rs56046522	0.92[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs56381832	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61850977	0.98[EUR][1000 genomes]
rs61850984	0.91[ASN][1000 genomes]
rs61850985	0.91[ASN][1000 genomes]
rs61850986	0.91[ASN][1000 genomes]
rs7522532	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7523875	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211397800-211405200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr1:211400800-211403400	Enhancers	Primary T helper cells fromperipheralblood	blood
3	chr1:211401600-211402200	Enhancers	Primary T cells fromperipheralblood	blood
4	chr1:211401600-211402400	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr1:211401600-211402600	Enhancers	Primary T cells from cord blood	blood
6	chr1:211401600-211402600	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr1:211401600-211402800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr1:211401600-211403000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr1:211401600-211403200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr1:211401600-211403200	Enhancers	Fetal Thymus	thymus
11	chr1:211401600-211403400	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr1:211401800-211402600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr1:211402000-211402400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
14	chr1:211402000-211403200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
15	chr1:211402000-211403200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr1:211402000-211403200	Enhancers	Dnd41	blood
17	chr1:211402000-211403400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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