Variant report

Variant	rs61854426
Chromosome Location	chr10:91432105-91432106
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:91428126..91429967-chr10:91431808..91434039,2	K562	blood:
2	chr10:91403479..91406981-chr10:91430382..91435913,4	MCF-7	breast:
3	chr10:91427748..91429967-chr10:91430864..91434039,3	K562	blood:

Variant related genes	Relation type
ENSG00000249962	Chromatin interaction
ENSG00000232936	Chromatin interaction
ENSG00000152782	Chromatin interaction

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs11815863	0.89[EUR][1000 genomes]
rs11816439	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1409320	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1555867	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17125847	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17126187	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17126255	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17127289	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17127307	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17127699	1.00[ASN][1000 genomes]
rs17127932	1.00[ASN][1000 genomes]
rs2900801	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41524248	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4933516	1.00[ASN][1000 genomes]
rs4934500	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58701936	1.00[ASN][1000 genomes]
rs61853458	0.94[EUR][1000 genomes]
rs61853459	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854360	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854361	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854362	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854424	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854425	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854427	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854431	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61854432	0.94[EUR][1000 genomes]
rs61854435	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869183	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869184	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869185	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869215	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869218	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61869802	1.00[ASN][1000 genomes]
rs61870760	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870761	0.89[EUR][1000 genomes]
rs61870762	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870764	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870766	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870791	0.94[EUR][1000 genomes]
rs61870819	1.00[ASN][1000 genomes]
rs61870820	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870821	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870822	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61870823	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61872466	1.00[ASN][1000 genomes]
rs61872467	1.00[ASN][1000 genomes]
rs6586212	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6586219	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6586222	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6586223	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7101125	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7895137	1.00[ASN][1000 genomes]
rs7898020	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7914918	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91431200-91432800	Weak transcription	Fetal Intestine Small	intestine
2	chr10:91431400-91435400	Weak transcription	HepG2	liver

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