The 2.0 version of rSNPBase

Variant report

Variant rs61856552
Chromosome Location chr10:44542522-44542523
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:44538200-44547000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr10:44539000-44543200 Enhancers Fetal Muscle Leg muscle
3 chr10:44539000-44543800 Enhancers Fetal Stomach stomach
4 chr10:44539200-44543200 Enhancers Ovary ovary
5 chr10:44539400-44546800 Weak transcription Right Ventricle heart
6 chr10:44539600-44542600 Enhancers NHDF-Ad bronchial
7 chr10:44539600-44543200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr10:44539800-44543400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr10:44540200-44542800 Enhancers Colon Smooth Muscle Colon
10 chr10:44540400-44542800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr10:44540400-44543000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr10:44540600-44542800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr10:44540600-44543600 Enhancers Fetal Kidney kidney
14 chr10:44540800-44542600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr10:44540800-44542600 Enhancers Brain Cingulate Gyrus brain
16 chr10:44540800-44543400 Enhancers Rectal Smooth Muscle rectum
17 chr10:44540800-44544800 Weak transcription Lung lung
18 chr10:44541000-44542600 Enhancers Osteobl bone
19 chr10:44541000-44543200 Enhancers Brain Anterior Caudate brain
20 chr10:44541200-44542600 Enhancers Brain Angular Gyrus brain
21 chr10:44541200-44549800 Weak transcription Left Ventricle heart
22 chr10:44541400-44543000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr10:44541400-44543200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr10:44541400-44543200 Enhancers Pancreas Pancrea
25 chr10:44541600-44542600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr10:44541600-44542800 Enhancers NHEK skin
27 chr10:44541600-44543200 Enhancers Spleen Spleen
28 chr10:44541600-44543400 Enhancers Stomach Mucosa stomach
29 chr10:44541800-44542600 Enhancers Aorta Aorta
30 chr10:44541800-44543000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr10:44541800-44543000 Enhancers Cortex derived primary cultured neurospheres brain
32 chr10:44541800-44543200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:44541800-44543400 Enhancers Adipose Nuclei Adipose
34 chr10:44542000-44542600 Flanking Active TSS Brain Hippocampus Middle brain
35 chr10:44542000-44542600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr10:44542000-44542600 Enhancers Fetal Intestine Small intestine
37 chr10:44542000-44543000 Enhancers Duodenum Smooth Muscle Duodenum
38 chr10:44542000-44543200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr10:44542000-44543200 Enhancers Gastric stomach
40 chr10:44542200-44542800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr10:44542200-44542800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr10:44542200-44542800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr10:44542200-44542800 Enhancers Stomach Smooth Muscle stomach
44 chr10:44542200-44543000 Enhancers Primary neutrophils fromperipheralblood blood
45 chr10:44542200-44543200 Enhancers Esophagus oesophagus
46 chr10:44542200-44543200 Enhancers Fetal Lung lung
47 chr10:44542200-44546600 Weak transcription Fetal Brain Male brain
48 chr10:44542200-44547000 Weak transcription Right Atrium heart
49 chr10:44542400-44542600 Enhancers Brain Inferior Temporal Lobe brain
50 chr10:44542400-44542800 Enhancers NH-A brain

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Last update: Aug 31, 2015