The 2.0 version of rSNPBase

Variant report

Variant rs61858069
Chromosome Location chr10:52284432-52284433
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:52262200-52287200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr10:52271600-52300600 Weak transcription Aorta Aorta
3 chr10:52272400-52284600 Weak transcription Stomach Smooth Muscle stomach
4 chr10:52272600-52302800 Weak transcription Fetal Stomach stomach
5 chr10:52272800-52288200 Weak transcription HSMMtube muscle
6 chr10:52273200-52285800 Weak transcription K562 blood
7 chr10:52273200-52287200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr10:52273200-52287400 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr10:52273200-52288400 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr10:52273400-52286000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr10:52273400-52287000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr10:52273400-52287200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr10:52273600-52286800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr10:52273600-52287400 Weak transcription GM12878-XiMat blood
15 chr10:52273600-52289600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr10:52273600-52298400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr10:52273600-52299800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr10:52274000-52287200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr10:52274800-52288200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr10:52275200-52294200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr10:52275600-52285000 Weak transcription Gastric stomach
22 chr10:52275600-52286800 Weak transcription Pancreas Pancrea
23 chr10:52276200-52286200 Weak transcription Fetal Heart heart
24 chr10:52279400-52298200 Weak transcription Fetal Intestine Small intestine
25 chr10:52279600-52286600 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr10:52279600-52286800 Weak transcription Left Ventricle heart
27 chr10:52279600-52290000 Weak transcription Primary B cells from cord blood blood
28 chr10:52279600-52298400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr10:52279600-52298400 Weak transcription Primary B cells from peripheral blood blood
30 chr10:52279600-52298800 Weak transcription Lung lung
31 chr10:52279800-52286400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr10:52279800-52286800 Weak transcription Primary T cells fromperipheralblood blood
33 chr10:52279800-52287200 Weak transcription Primary hematopoietic stem cells blood
34 chr10:52279800-52298600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr10:52280200-52328000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr10:52282200-52284600 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr10:52282200-52285200 Enhancers Brain Hippocampus Middle brain
38 chr10:52282200-52286200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr10:52282200-52286400 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr10:52282400-52284600 Enhancers Brain Cingulate Gyrus brain
41 chr10:52282400-52284600 Enhancers Brain Inferior Temporal Lobe brain
42 chr10:52282400-52284600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr10:52282400-52284800 Enhancers HUES6 Cell Line embryonic stem cell
44 chr10:52282400-52285400 Enhancers HUES48 Cell Line embryonic stem cell
45 chr10:52282400-52285600 Enhancers HUES64 Cell Line embryonic stem cell
46 chr10:52282600-52284800 Enhancers Fetal Lung lung
47 chr10:52282600-52285200 Enhancers Brain Substantia Nigra brain
48 chr10:52282600-52285800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr10:52282800-52284600 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr10:52282800-52291200 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015