The 2.0 version of rSNPBase

Variant report

Variant rs72801781
Chromosome Location chr10:52235533-52235534
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:52208000-52240200 Weak transcription Esophagus oesophagus
2 chr10:52218000-52240200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr10:52220000-52243600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr10:52220400-52237800 Weak transcription Ovary ovary
5 chr10:52229800-52242600 Weak transcription Thymus Thymus
6 chr10:52229800-52244000 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr10:52229800-52252000 Weak transcription Aorta Aorta
8 chr10:52230000-52237600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr10:52230000-52240000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr10:52230400-52236200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr10:52230400-52236400 Weak transcription Primary B cells from cord blood blood
12 chr10:52230400-52236400 Weak transcription Lung lung
13 chr10:52230400-52240000 Weak transcription Primary T cells fromperipheralblood blood
14 chr10:52230600-52236000 Weak transcription Primary hematopoietic stem cells blood
15 chr10:52230600-52236400 Weak transcription Fetal Thymus thymus
16 chr10:52230600-52256400 Weak transcription Rectal Smooth Muscle rectum
17 chr10:52231000-52235800 Weak transcription HSMM muscle
18 chr10:52231000-52236200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr10:52231000-52236200 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr10:52231000-52236400 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr10:52231000-52237600 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr10:52231000-52239400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr10:52231200-52236200 Weak transcription Fetal Lung lung
24 chr10:52231200-52236400 Weak transcription Primary B cells from peripheral blood blood
25 chr10:52231200-52236400 Weak transcription Liver Liver
26 chr10:52231200-52236400 Weak transcription Fetal Intestine Large intestine
27 chr10:52231200-52236400 Weak transcription Fetal Intestine Small intestine
28 chr10:52231200-52236400 Weak transcription Spleen Spleen
29 chr10:52231200-52240000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr10:52231200-52240200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr10:52231200-52242000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr10:52231200-52244600 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr10:52231200-52257800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr10:52231400-52236400 Weak transcription Primary T cells from cord blood blood
35 chr10:52231400-52236600 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr10:52231400-52238600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr10:52231600-52236400 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr10:52231600-52236400 Weak transcription Placenta Placenta
39 chr10:52231800-52243000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr10:52232200-52236200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr10:52232400-52242400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr10:52233800-52238000 Weak transcription Small Intestine intestine
43 chr10:52234000-52237800 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr10:52234000-52240200 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr10:52234000-52240200 Weak transcription Gastric stomach
46 chr10:52234000-52240200 Weak transcription Right Ventricle heart
47 chr10:52234000-52242200 Weak transcription Psoas Muscle Psoas
48 chr10:52234000-52243600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr10:52234000-52261600 Weak transcription Pancreas Pancrea
50 chr10:52234200-52246800 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015