The 2.0 version of rSNPBase

Variant report

Variant rs61870098
Chromosome Location chr10:116241198-116241199
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116194400-116251600 Weak transcription Small Intestine intestine
2 chr10:116199200-116243400 Weak transcription Brain Hippocampus Middle brain
3 chr10:116199600-116244600 Weak transcription A549 lung
4 chr10:116199800-116249200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr10:116201000-116242400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr10:116214600-116263600 Weak transcription Rectal Smooth Muscle rectum
7 chr10:116218400-116249200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr10:116222200-116264400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr10:116225000-116267200 Weak transcription Aorta Aorta
10 chr10:116225600-116242800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr10:116225600-116246800 Weak transcription NHEK skin
12 chr10:116225600-116278800 Weak transcription HSMM muscle
13 chr10:116227200-116247400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr10:116229400-116244800 Weak transcription Thymus Thymus
15 chr10:116230000-116243600 Weak transcription Lung lung
16 chr10:116230600-116241800 Weak transcription HSMMtube muscle
17 chr10:116231000-116244400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr10:116231200-116243600 Weak transcription Fetal Thymus thymus
19 chr10:116231200-116251600 Weak transcription GM12878-XiMat blood
20 chr10:116231400-116244400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr10:116231800-116244800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr10:116231800-116249200 Weak transcription Pancreas Pancrea
23 chr10:116232400-116246800 Weak transcription HMEC breast
24 chr10:116232600-116244600 Weak transcription Colonic Mucosa Colon
25 chr10:116232800-116244600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr10:116232800-116244800 Weak transcription Hela-S3 cervix
27 chr10:116232800-116245600 Weak transcription Brain Anterior Caudate brain
28 chr10:116233000-116243800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr10:116233000-116244600 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr10:116233000-116247600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr10:116233000-116248800 Weak transcription H1 Cell Line embryonic stem cell
32 chr10:116233200-116243400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr10:116233200-116245600 Weak transcription HUVEC blood vessel
34 chr10:116233400-116243000 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr10:116233800-116244400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr10:116234000-116243200 Weak transcription Fetal Intestine Small intestine
37 chr10:116234000-116247800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr10:116236200-116242800 Weak transcription Fetal Muscle Trunk muscle
39 chr10:116236600-116242800 Genic enhancers Primary T cells from cord blood blood
40 chr10:116237200-116246200 Weak transcription Brain Substantia Nigra brain
41 chr10:116237400-116241200 Weak transcription Colon Smooth Muscle Colon
42 chr10:116237400-116242000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr10:116237400-116243000 Weak transcription Stomach Smooth Muscle stomach
44 chr10:116237400-116243200 Weak transcription Adipose Nuclei Adipose
45 chr10:116237400-116244400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr10:116237400-116248800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr10:116237800-116242400 Weak transcription Fetal Muscle Leg muscle
48 chr10:116237800-116249000 Strong transcription Primary T cells fromperipheralblood blood
49 chr10:116238200-116241600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
50 chr10:116238200-116244600 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015