Variant report

Variant	rs61891811
Chromosome Location	chr11:10396137-10396138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:10390356..10392887-chr11:10395705..10397577,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17399616	1.00[AMR][1000 genomes]
rs61891808	1.00[AMR][1000 genomes]
rs61891809	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61891810	1.00[AMR][1000 genomes]
rs61891813	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61891815	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61891816	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10388600-10396200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:10388800-10401400	Weak transcription	Esophagus	oesophagus
3	chr11:10389000-10401400	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr11:10389000-10401600	Weak transcription	Right Atrium	heart
5	chr11:10391800-10403800	Enhancers	Adipose Nuclei	Adipose
6	chr11:10392000-10398000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr11:10392600-10396200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr11:10392800-10403000	Enhancers	NHLF	lung
9	chr11:10394200-10396200	Enhancers	Rectal Smooth Muscle	rectum
10	chr11:10394600-10396600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr11:10394600-10402200	Enhancers	NHDF-Ad	bronchial
12	chr11:10394600-10403000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr11:10394800-10397200	Enhancers	Osteobl	bone
14	chr11:10394800-10398400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr11:10394800-10398400	Enhancers	Colon Smooth Muscle	Colon
16	chr11:10394800-10399200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr11:10394800-10399400	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr11:10395200-10396200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr11:10395200-10396200	Enhancers	Pancreatic Islets	Pancreatic Islet
20	chr11:10395200-10396200	Weak transcription	Fetal Muscle Leg	muscle
21	chr11:10395200-10396200	Weak transcription	Spleen	Spleen
22	chr11:10395200-10396400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr11:10395200-10396600	Weak transcription	HSMMtube	muscle
24	chr11:10395200-10397200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr11:10395200-10400600	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr11:10395200-10401400	Weak transcription	Left Ventricle	heart
27	chr11:10395200-10401400	Weak transcription	Lung	lung
28	chr11:10395800-10398000	Enhancers	Psoas Muscle	Psoas
29	chr11:10395800-10398000	Enhancers	Stomach Smooth Muscle	stomach
30	chr11:10395800-10398000	Enhancers	NH-A	brain
31	chr11:10395800-10399600	Enhancers	Muscle Satellite Cultured Cells	--
32	chr11:10396000-10396800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr11:10396000-10397000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr11:10396000-10398400	Enhancers	Ovary	ovary

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