The 2.0 version of rSNPBase

Variant report

Variant rs61957248
Chromosome Location chr13:52738193-52738194
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52733800-52743000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:52733800-52757000 Weak transcription Spleen Spleen
3 chr13:52734000-52740200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr13:52734000-52760000 Weak transcription Gastric stomach
5 chr13:52734200-52739000 Weak transcription Fetal Muscle Trunk muscle
6 chr13:52734200-52739600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr13:52734200-52739800 Enhancers Brain Hippocampus Middle brain
8 chr13:52734200-52740200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr13:52734200-52741200 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr13:52734200-52742200 Weak transcription Fetal Lung lung
11 chr13:52734200-52742400 Weak transcription Brain Germinal Matrix brain
12 chr13:52734200-52742400 Weak transcription Fetal Brain Female brain
13 chr13:52734200-52742600 Weak transcription Esophagus oesophagus
14 chr13:52734200-52743000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr13:52734200-52747800 Weak transcription Fetal Brain Male brain
16 chr13:52734200-52751800 Weak transcription Psoas Muscle Psoas
17 chr13:52734200-52752400 Weak transcription GM12878-XiMat blood
18 chr13:52734200-52754000 Weak transcription Right Ventricle heart
19 chr13:52734200-52754000 Weak transcription Hela-S3 cervix
20 chr13:52734400-52738800 Weak transcription Liver Liver
21 chr13:52734400-52739200 Weak transcription Stomach Mucosa stomach
22 chr13:52734400-52739600 Weak transcription Fetal Muscle Leg muscle
23 chr13:52734400-52739600 Weak transcription Fetal Stomach stomach
24 chr13:52734400-52739600 Weak transcription Ovary ovary
25 chr13:52734400-52739600 Weak transcription Rectal Smooth Muscle rectum
26 chr13:52734400-52739800 Weak transcription Primary B cells from peripheral blood blood
27 chr13:52734400-52740200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr13:52734400-52741200 Weak transcription Stomach Smooth Muscle stomach
29 chr13:52734400-52741600 Weak transcription Primary monocytes fromperipheralblood blood
30 chr13:52734400-52741800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr13:52734400-52742400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr13:52734400-52742400 Weak transcription Pancreas Pancrea
33 chr13:52734400-52746000 Weak transcription Primary B cells from cord blood blood
34 chr13:52734400-52746200 Weak transcription Placenta Amnion Placenta Amnion
35 chr13:52734400-52751200 Weak transcription Colon Smooth Muscle Colon
36 chr13:52734400-52753400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr13:52734400-52753600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr13:52734400-52754000 Weak transcription NHEK skin
39 chr13:52734400-52761000 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr13:52734400-52768000 Weak transcription Aorta Aorta
41 chr13:52734600-52739600 Weak transcription Left Ventricle heart
42 chr13:52734600-52739800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr13:52734600-52742800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr13:52734600-52766000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr13:52734800-52742400 Weak transcription H1 Cell Line embryonic stem cell
46 chr13:52734800-52742400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr13:52735000-52741200 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr13:52735000-52741800 Weak transcription Primary T cells fromperipheralblood blood
49 chr13:52735000-52743000 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr13:52735000-52744200 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015