Variant report

Variant	rs61983313
Chromosome Location	chr14:84767045-84767046
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs4411445	1.00[ASN][1000 genomes]
rs61983315	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61983320	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61983323	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61984186	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61984209	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61984241	1.00[ASN][1000 genomes]
rs61984242	1.00[ASN][1000 genomes]
rs61984243	1.00[ASN][1000 genomes]
rs61984248	1.00[ASN][1000 genomes]
rs61984249	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61984250	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61984252	1.00[ASN][1000 genomes]
rs61984753	1.00[ASN][1000 genomes]
rs61985587	1.00[ASN][1000 genomes]
rs61985589	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985590	1.00[ASN][1000 genomes]
rs61985591	1.00[ASN][1000 genomes]
rs61985592	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985593	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985594	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985599	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985601	1.00[ASN][1000 genomes]
rs61985645	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61985646	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7142452	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7154659	1.00[ASN][1000 genomes]
rs7155005	1.00[ASN][1000 genomes]
rs8010754	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902161	chr14:84699866-84769903	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv832845	chr14:84726378-84900199	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84765400-84769600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:84766000-84768400	Weak transcription	Adipose Nuclei	Adipose
3	chr14:84766000-84769000	Weak transcription	Esophagus	oesophagus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links