Variant report

Variant rs62006179
Chromosome Location chr15:45998044-45998045
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:45996000-45998200 Active TSS HUES6 Cell Line embryonic stem cell
2 chr15:45996200-45998200 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr15:45996200-45998200 Active TSS H1 Cell Line embryonic stem cell
4 chr15:45996200-45998200 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr15:45996200-45998200 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr15:45996400-45998200 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr15:45996400-45998200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr15:45996400-45998200 Active TSS HUES64 Cell Line embryonic stem cell
9 chr15:45996400-45998200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr15:45996400-45998200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr15:45996400-45998200 Active TSS Brain Angular Gyrus brain
12 chr15:45996600-45998200 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr15:45996600-45998200 Active TSS Brain Cingulate Gyrus brain
14 chr15:45996600-45998200 Active TSS Colon Smooth Muscle Colon
15 chr15:45996600-45998200 Active TSS NHEK skin
16 chr15:45996600-45998400 Active TSS Muscle Satellite Cultured Cells --
17 chr15:45996800-45998200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr15:45996800-45998200 Active TSS Pancreatic Islets Pancreatic Islet
19 chr15:45996800-45998200 Bivalent/Poised TSS HSMMtube muscle
20 chr15:45996800-45998200 Active TSS Osteobl bone
21 chr15:45997000-45998200 Active TSS Primary T cells from cord blood blood
22 chr15:45997000-45998200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
23 chr15:45997000-45998200 Active TSS Ovary ovary
24 chr15:45997000-45998200 Active TSS Psoas Muscle Psoas
25 chr15:45997000-45998200 Active TSS NHLF lung
26 chr15:45997000-46002800 Weak transcription Spleen Spleen
27 chr15:45997200-45998200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
28 chr15:45997200-45998200 Active TSS Primary Natural Killer cells fromperipheralblood blood
29 chr15:45997200-45998200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr15:45997200-45998200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr15:45997200-45998200 Active TSS Brain Hippocampus Middle brain
32 chr15:45997200-45998200 Active TSS Colonic Mucosa Colon
33 chr15:45997200-45998200 Active TSS Fetal Intestine Small intestine
34 chr15:45997200-45998200 Weak transcription Gastric stomach
35 chr15:45997200-45998200 Active TSS Rectal Mucosa Donor 31 rectum
36 chr15:45997200-45998400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
37 chr15:45997200-45998600 Active TSS Stomach Smooth Muscle stomach
38 chr15:45997400-45998200 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
39 chr15:45997400-45998200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
40 chr15:45997400-45998200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:45997400-45998200 Flanking Active TSS Adipose Nuclei Adipose
42 chr15:45997400-45998200 Flanking Active TSS Liver Liver
43 chr15:45997400-45998200 Active TSS Fetal Muscle Trunk muscle
44 chr15:45997400-45998200 Flanking Active TSS Hela-S3 cervix
45 chr15:45997600-45998200 Flanking Active TSS Primary B cells from peripheral blood blood
46 chr15:45997600-45998200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:45997600-45998200 Active TSS Fetal Brain Female brain
48 chr15:45997600-45998200 Flanking Active TSS HMEC breast
49 chr15:45997600-45998200 Flanking Active TSS NH-A brain
50 chr15:45997600-45998400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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