Variant report

Variant	rs62065586
Chromosome Location	chr17:63385453-63385454
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs16962293	0.84[AMR][1000 genomes]
rs2159542	0.88[EUR][1000 genomes]
rs55865571	0.82[EUR][1000 genomes]
rs60714481	0.88[EUR][1000 genomes]
rs60799111	0.88[EUR][1000 genomes]
rs62064355	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62064356	0.82[AMR][1000 genomes]
rs62064358	0.88[EUR][1000 genomes]
rs62065560	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065561	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065562	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065563	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065567	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065569	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065570	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065587	0.84[AMR][1000 genomes]
rs6504300	0.88[EUR][1000 genomes]
rs7221306	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63382800-63387600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr17:63383800-63387000	Enhancers	NHDF-Ad	bronchial
3	chr17:63384600-63385600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr17:63384600-63386800	Enhancers	NHLF	lung
5	chr17:63384600-63391400	Weak transcription	Psoas Muscle	Psoas
6	chr17:63384800-63385800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr17:63384800-63386600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr17:63384800-63386800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr17:63385000-63386000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr17:63385000-63386200	Enhancers	Skeletal Muscle Male	skeletal muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links