Variant report

Variant rs62110031
Chromosome Location chr19:28236519-28236520
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28217000-28237600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:28220200-28238000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr19:28220200-28238000 Weak transcription HMEC breast
4 chr19:28220800-28237800 Weak transcription Brain Cingulate Gyrus brain
5 chr19:28223400-28237000 Weak transcription Brain Angular Gyrus brain
6 chr19:28223600-28238200 ZNF genes & repeats Brain Germinal Matrix brain
7 chr19:28223600-28238800 ZNF genes & repeats Fetal Brain Female brain
8 chr19:28223800-28237800 Weak transcription Primary B cells from cord blood blood
9 chr19:28224200-28238200 ZNF genes & repeats Aorta Aorta
10 chr19:28225200-28238000 Weak transcription Liver Liver
11 chr19:28225400-28237000 Weak transcription Brain Substantia Nigra brain
12 chr19:28227800-28237600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr19:28227800-28241200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr19:28228200-28237800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr19:28228800-28237800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr19:28229400-28238000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:28230600-28237400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr19:28230800-28237200 Weak transcription Brain Hippocampus Middle brain
19 chr19:28230800-28238200 Weak transcription A549 lung
20 chr19:28231000-28238000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
21 chr19:28231200-28237000 Weak transcription Pancreas Pancrea
22 chr19:28231400-28237000 Weak transcription Right Atrium heart
23 chr19:28231400-28238400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr19:28231600-28237400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr19:28231800-28237400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr19:28233000-28236600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr19:28233200-28237800 Weak transcription Adipose Nuclei Adipose
28 chr19:28233400-28237600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr19:28233600-28237800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr19:28233800-28237200 ZNF genes & repeats Fetal Stomach stomach
31 chr19:28234000-28237600 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr19:28234400-28237600 Weak transcription Colon Smooth Muscle Colon
33 chr19:28235000-28237200 Strong transcription Ovary ovary
34 chr19:28235400-28237800 Enhancers HSMMtube muscle
35 chr19:28235400-28238200 Enhancers Left Ventricle heart
36 chr19:28235600-28237800 Enhancers Skeletal Muscle Male skeletal muscle
37 chr19:28235600-28237800 Enhancers Skeletal Muscle Female skeletal muscle
38 chr19:28235600-28238200 Enhancers Psoas Muscle Psoas
39 chr19:28235600-28238200 Enhancers Right Ventricle heart
40 chr19:28235800-28237400 Weak transcription Stomach Smooth Muscle stomach
41 chr19:28235800-28237600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:28235800-28238200 Enhancers HSMM muscle
43 chr19:28236000-28237000 Enhancers Fetal Heart heart
44 chr19:28236000-28237400 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr19:28236400-28236800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr19:28236400-28237400 Weak transcription Duodenum Smooth Muscle Duodenum

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