The 2.0 version of rSNPBase

Variant report

Variant rs62180090
Chromosome Location chr2:181859560-181859561
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181846400-181868600 Weak transcription Gastric stomach
2 chr2:181846600-181872400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:181847000-181862400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr2:181847000-181862800 Weak transcription Placenta Placenta
5 chr2:181847000-181870000 Weak transcription Pancreas Pancrea
6 chr2:181847000-181873200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:181847400-181870000 Weak transcription Right Ventricle heart
8 chr2:181847600-181864200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:181847600-181868400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:181849000-181862000 Weak transcription Primary B cells from peripheral blood blood
11 chr2:181849000-181872800 Weak transcription Fetal Intestine Large intestine
12 chr2:181849200-181860000 Weak transcription Fetal Intestine Small intestine
13 chr2:181849400-181880000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr2:181850000-181873000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:181850800-181869800 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr2:181851000-181859600 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr2:181851000-181859800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr2:181851000-181861200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:181851000-181866000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr2:181851000-181866200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr2:181851000-181866400 Weak transcription Small Intestine intestine
22 chr2:181851000-181870000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:181851000-181872200 Weak transcription Left Ventricle heart
24 chr2:181851200-181859600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:181851200-181864000 Weak transcription Brain Anterior Caudate brain
26 chr2:181851200-181865600 Weak transcription Fetal Brain Male brain
27 chr2:181851200-181866600 Weak transcription Duodenum Mucosa Duodenum
28 chr2:181851200-181876200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr2:181853000-181860600 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr2:181853000-181865600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr2:181853000-181865800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr2:181853000-181869800 Weak transcription Brain Angular Gyrus brain
33 chr2:181853000-181869800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr2:181854000-181863000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:181854400-181862000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:181854600-181872800 Weak transcription NHLF lung
37 chr2:181855200-181860800 Weak transcription NHEK skin
38 chr2:181855200-181871000 Weak transcription HUVEC blood vessel
39 chr2:181855400-181863800 Weak transcription K562 blood
40 chr2:181855600-181860000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:181855600-181872400 Weak transcription Adipose Nuclei Adipose
42 chr2:181856200-181860000 Strong transcription NH-A brain
43 chr2:181856200-181860200 Weak transcription Primary T cells fromperipheralblood blood
44 chr2:181856200-181870200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr2:181856400-181860000 Strong transcription Muscle Satellite Cultured Cells --
46 chr2:181856400-181863000 Weak transcription H1 Cell Line embryonic stem cell
47 chr2:181856400-181863200 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr2:181856600-181863000 Weak transcription H9 Cell Line embryonic stem cell
49 chr2:181856800-181859800 Weak transcription Fetal Lung lung
50 chr2:181856800-181862800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015