Variant report

Variant rs62240253
Chromosome Location chr3:60132040-60132041
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:60123400-60141200 Weak transcription Pancreas Pancrea
2 chr3:60124800-60145400 Weak transcription Thymus Thymus
3 chr3:60128200-60132200 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr3:60128400-60132400 Weak transcription Psoas Muscle Psoas
5 chr3:60131000-60132400 Enhancers Brain Anterior Caudate brain
6 chr3:60131000-60133600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr3:60131000-60133600 Enhancers Brain Inferior Temporal Lobe brain
8 chr3:60131200-60133600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:60131200-60133800 Enhancers Brain Hippocampus Middle brain
10 chr3:60131400-60132200 Weak transcription Brain Substantia Nigra brain
11 chr3:60131400-60133200 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr3:60131600-60132400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr3:60131600-60133200 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr3:60131600-60133400 Enhancers Cortex derived primary cultured neurospheres brain
15 chr3:60131600-60133800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr3:60131800-60132200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr3:60131800-60132800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr3:60131800-60133400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:60132000-60132200 Enhancers Brain Germinal Matrix brain
20 chr3:60132000-60132400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr3:60132000-60132400 Active TSS Brain Cingulate Gyrus brain
22 chr3:60132000-60132600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr3:60132000-60132600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr3:60132000-60132600 Enhancers Brain Angular Gyrus brain
25 chr3:60132000-60133400 Enhancers HUES48 Cell Line embryonic stem cell

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