The 2.0 version of rSNPBase

Variant report

Variant rs62247257
Chromosome Location chr3:17118547-17118548
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17089400-17135000 Weak transcription Pancreas Pancrea
2 chr3:17095400-17120600 Weak transcription Aorta Aorta
3 chr3:17095400-17120600 Weak transcription Lung lung
4 chr3:17097600-17120400 Weak transcription Spleen Spleen
5 chr3:17103400-17134400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr3:17107000-17133400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr3:17107200-17126200 Weak transcription Fetal Kidney kidney
8 chr3:17107600-17122800 Weak transcription Fetal Muscle Trunk muscle
9 chr3:17108200-17120600 Weak transcription Stomach Smooth Muscle stomach
10 chr3:17108600-17118600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr3:17109800-17120800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:17110800-17132200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr3:17111400-17129400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:17111800-17130600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:17112000-17132000 Weak transcription Duodenum Mucosa Duodenum
16 chr3:17112200-17118600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:17112200-17137400 Weak transcription Brain Germinal Matrix brain
18 chr3:17112600-17118600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:17112600-17118600 Weak transcription Fetal Heart heart
20 chr3:17112600-17120600 Weak transcription Gastric stomach
21 chr3:17112600-17120600 Weak transcription Ovary ovary
22 chr3:17112600-17120800 Weak transcription Adipose Nuclei Adipose
23 chr3:17112600-17123000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr3:17112600-17124000 Weak transcription Fetal Intestine Large intestine
25 chr3:17112600-17124600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:17112600-17126000 Weak transcription Fetal Brain Female brain
27 chr3:17112600-17127800 Weak transcription Fetal Lung lung
28 chr3:17112600-17129600 Weak transcription Brain Angular Gyrus brain
29 chr3:17112600-17130200 Weak transcription Brain Anterior Caudate brain
30 chr3:17112600-17135800 Weak transcription H1 Cell Line embryonic stem cell
31 chr3:17112800-17119600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr3:17112800-17119800 Weak transcription Fetal Stomach stomach
33 chr3:17112800-17131200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr3:17112800-17135200 Weak transcription Fetal Brain Male brain
35 chr3:17114400-17126800 Strong transcription Primary B cells from cord blood blood
36 chr3:17114400-17131600 Weak transcription Colonic Mucosa Colon
37 chr3:17116000-17119600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr3:17116000-17121200 Strong transcription Placenta Placenta
39 chr3:17116200-17120800 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr3:17116400-17119200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr3:17116400-17122200 Weak transcription Primary hematopoietic stem cells blood
42 chr3:17116400-17122400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr3:17116400-17122800 Weak transcription Fetal Thymus thymus
44 chr3:17116600-17118600 Weak transcription Primary T cells fromperipheralblood blood
45 chr3:17116600-17120000 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr3:17116600-17122800 Strong transcription Primary T cells from cord blood blood
47 chr3:17116800-17119200 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr3:17116800-17126000 Weak transcription Dnd41 blood
49 chr3:17116800-17130200 Weak transcription Thymus Thymus
50 chr3:17117400-17125000 Strong transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015