Variant report
Variant | rs11128818 |
---|---|
Chromosome Location | chr3:17143621-17143622 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11549706 | 1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13059760 | 0.93[CEU][hapmap];0.85[EUR][1000 genomes] |
rs13062572 | 0.93[CEU][hapmap];0.84[EUR][1000 genomes] |
rs13066204 | 0.93[CEU][hapmap] |
rs13073832 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13077235 | 0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13085309 | 0.93[CEU][hapmap] |
rs13088560 | 0.86[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs13089569 | 1.00[CEU][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13097797 | 0.85[EUR][1000 genomes] |
rs17272810 | 0.86[CEU][hapmap] |
rs17272831 | 0.86[CEU][hapmap] |
rs34704046 | 0.85[EUR][1000 genomes] |
rs34937985 | 0.89[EUR][1000 genomes] |
rs35185988 | 1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs35216408 | 0.92[EUR][1000 genomes] |
rs35281010 | 0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs35545382 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs36118680 | 0.85[EUR][1000 genomes] |
rs3935970 | 0.86[CEU][hapmap] |
rs62247257 | 0.85[EUR][1000 genomes] |
rs6789069 | 0.80[CEU][hapmap] |
rs7616589 | 0.86[CEU][hapmap] |
rs7652293 | 0.86[CEU][hapmap] |
rs7652874 | 0.93[CEU][hapmap] |
rs9834723 | 0.85[CEU][hapmap] |
rs9845137 | 0.87[CEU][hapmap] |
rs9876768 | 0.86[CEU][hapmap] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:17131200-17143800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |