Variant report
| Variant | rs62254460 |
|---|---|
| Chromosome Location | chr3:69265371-69265372 |
| allele | A/C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:69232000-69275600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr3:69242400-69281600 | Weak transcription | Brain Germinal Matrix | brain |
| 3 | chr3:69242600-69268800 | Weak transcription | Spleen | Spleen |
| 4 | chr3:69246200-69266800 | Weak transcription | HSMM | muscle |
| 5 | chr3:69250000-69269200 | Weak transcription | Thymus | Thymus |
| 6 | chr3:69250000-69272400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 7 | chr3:69250000-69281600 | Weak transcription | Esophagus | oesophagus |
| 8 | chr3:69250200-69268800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr3:69250200-69268800 | Weak transcription | Ovary | ovary |
| 10 | chr3:69250200-69286000 | Weak transcription | Colonic Mucosa | Colon |
| 11 | chr3:69250400-69268400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 12 | chr3:69250400-69280000 | Weak transcription | Fetal Kidney | kidney |
| 13 | chr3:69253000-69266400 | Weak transcription | Small Intestine | intestine |
| 14 | chr3:69253000-69297600 | Weak transcription | Gastric | stomach |
| 15 | chr3:69253400-69277400 | Weak transcription | Left Ventricle | heart |
| 16 | chr3:69253600-69266600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 17 | chr3:69253600-69267600 | Weak transcription | Placenta | Placenta |
| 18 | chr3:69254000-69280800 | Weak transcription | Pancreas | Pancrea |
| 19 | chr3:69254000-69286000 | Weak transcription | Right Ventricle | heart |
| 20 | chr3:69254600-69299000 | Weak transcription | Fetal Brain Male | brain |
| 21 | chr3:69256600-69269200 | Weak transcription | Adipose Nuclei | Adipose |
| 22 | chr3:69259400-69266600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 23 | chr3:69260000-69285800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 24 | chr3:69261000-69269800 | Weak transcription | Fetal Muscle Leg | muscle |
| 25 | chr3:69261000-69272800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr3:69261000-69280400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr3:69262000-69265600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 28 | chr3:69262200-69266200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 29 | chr3:69262200-69274200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr3:69262400-69276000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 31 | chr3:69262600-69286200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 32 | chr3:69263000-69265400 | Strong transcription | Fetal Intestine Large | intestine |
| 33 | chr3:69263000-69266200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 34 | chr3:69263000-69269000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 35 | chr3:69263000-69273800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 36 | chr3:69263000-69274200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr3:69263200-69274000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr3:69263200-69274200 | Strong transcription | Dnd41 | blood |
| 39 | chr3:69263200-69274400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr3:69263400-69275000 | Weak transcription | Stomach Mucosa | stomach |
| 41 | chr3:69263600-69273800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 42 | chr3:69263600-69275000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 43 | chr3:69263800-69265400 | Weak transcription | Lung | lung |
| 44 | chr3:69263800-69266200 | Weak transcription | Fetal Heart | heart |
| 45 | chr3:69263800-69266200 | Weak transcription | Hela-S3 | cervix |
| 46 | chr3:69263800-69267000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr3:69263800-69268400 | Weak transcription | HMEC | breast |
| 48 | chr3:69263800-69268800 | Weak transcription | Brain Anterior Caudate | brain |
| 49 | chr3:69263800-69269000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 50 | chr3:69263800-69269200 | Weak transcription | Brain Substantia Nigra | brain |
