Variant report

Variant rs62255386
Chromosome Location chr3:24394433-24394434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24360400-24418000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:24381000-24394800 Weak transcription Brain Germinal Matrix brain
3 chr3:24390400-24401000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr3:24391000-24398600 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr3:24391200-24401000 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr3:24392600-24394800 Enhancers Colon Smooth Muscle Colon
7 chr3:24392800-24394600 Enhancers Skeletal Muscle Female skeletal muscle
8 chr3:24392800-24395000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr3:24392800-24396400 Enhancers Liver Liver
10 chr3:24392800-24396400 Enhancers HepG2 liver
11 chr3:24393000-24394600 Enhancers Skeletal Muscle Male skeletal muscle
12 chr3:24393000-24394800 Enhancers Brain Substantia Nigra brain
13 chr3:24393000-24395000 Enhancers Fetal Lung lung
14 chr3:24393000-24395200 Enhancers Psoas Muscle Psoas
15 chr3:24393200-24394800 Enhancers Brain Hippocampus Middle brain
16 chr3:24393200-24395400 Enhancers Fetal Intestine Small intestine
17 chr3:24393400-24394600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr3:24393400-24395200 Enhancers Fetal Kidney kidney
19 chr3:24393600-24394600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr3:24393600-24394800 Weak transcription Stomach Mucosa stomach
21 chr3:24393600-24397600 Weak transcription Aorta Aorta
22 chr3:24393600-24403800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr3:24393800-24395200 Flanking Active TSS K562 blood
24 chr3:24394000-24394800 Weak transcription Brain Angular Gyrus brain
25 chr3:24394000-24394800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr3:24394000-24394800 Weak transcription Right Atrium heart
27 chr3:24394000-24396800 Weak transcription HMEC breast
28 chr3:24394000-24397000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:24394000-24399200 Weak transcription Rectal Smooth Muscle rectum
30 chr3:24394000-24399400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:24394000-24403200 Weak transcription NHDF-Ad bronchial
32 chr3:24394000-24406600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr3:24394000-24406600 Weak transcription Ovary ovary
34 chr3:24394000-24406600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr3:24394000-24407800 Weak transcription Pancreas Pancrea
36 chr3:24394000-24407800 Weak transcription Stomach Smooth Muscle stomach
37 chr3:24394000-24431400 Weak transcription Gastric stomach
38 chr3:24394200-24403800 Weak transcription Adipose Nuclei Adipose
39 chr3:24394400-24394800 Weak transcription Fetal Intestine Large intestine
40 chr3:24394400-24403000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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